lineage | Count |
---|---|
104 | |
lineage4 | 3 |
lineage2.2.1.2 | 1 |
lineage3 | 1 |
lineage4.5 | 1 |
lineage2 | 1 |
lineage4.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.9 | 6 |
lineage2.2 | 3 |
La2 | 1 |
La1 | 2 |
lineage4.1.3 | 2 |
lineage3.1.2 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 129 |
ID | Drug resistance | Lineage | Country iso2 | SRR1172310 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR12142341 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1174897 | HR-TB | None | SRR19303884 | HR-TB | None | SRR15368973 | Other | None | SRR17658565 | Other | lineage3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19304036 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR1035239 | HR-TB | None | SRR3675465 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675311 | Other | None | SRR3675456 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675555 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675571 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR2693230 | Other | None | ERR1035138 | MDR-TB | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | SRR5341330 | HR-TB | None | ERR2693231 | Other | None | SRR5341333 | HR-TB | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | ERR278594 | HR-TB | None | SRR6045526 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045053 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046397 | Other | None | SRR6325448 | HR-TB | None | SRR6046046 | Other | None | SRR6325444 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325442 | HR-TB | None | ERR294248 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831117 | HR-TB | None | SRR6789626 | Other | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7496509 | Other | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323039 | HR-TB | None | SRR7496517 | Other | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR3283024 | Other | None | ERR323053 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797017 | Other | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797036 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR3797069 | Other | None | ERR3797083 | HR-TB | None | ERR4407463 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4188350 | HR-TB | None | ERR4769452 | HR-TB | None | ERR5336148 | Other | None | ERR4769450 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6359045 | HR-TB | None | ERR736835 | HR-TB | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736839 | Other | None | ERR736874 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786843 | Other | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None |
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