SRR3675495
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR11465351
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR1163221
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR17658565
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR26399349
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4769521
|
RR-TB
|
lineage4.9
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR6046644
|
HR-TB
|
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
|
None
|
SRR6458421
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6044942
|
HR-TB
|
lineage4.9
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
ERR2229143
|
RR-TB
|
lineage4.9
|
None
|
SRR23961542
|
Other
|
La1;lineage4.9
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR9119395
|
Sensitive
|
lineage2.2.1
|
None
|
ERR760733
|
MDR-TB
|
lineage4.1.2.1.1
|
None
|
ERR9786711
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR5311099
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR5073758
|
Sensitive
|
lineage2.2.1
|
vn
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
SRR3675456
|
RR-TB
|
lineage4.9;lineage7
|
None
|
SRR3675494
|
RR-TB
|
lineage4.9
|
None
|
SRR6831950
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3283017
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
SRR6079962
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR3675320
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9
|
None
|
ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3077978
|
RR-TB
|
lineage1.1
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
ERR323041
|
HR-TB
|
M.canetti;lineage2.1
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR9119096
|
RR-TB
|
lineage4.3.3
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR1162864
|
Other
|
lineage4.1.2.1
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR323047
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR6045555
|
Other
|
lineage4.9
|
None
|
SRR3675568
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR3275196
|
Other
|
lineage2.2.1
|
nl
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311098
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR9786986
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR4830325
|
Sensitive
|
lineage2.2.1
|
vn
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR2693229
|
RR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR3675322
|
HR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
ERR3797083
|
RR-TB
|
lineage4.9
|
None
|
ERR4821053
|
RR-TB
|
lineage3
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR2693228
|
RR-TB
|
lineage4.9
|
None
|
SRR26399539
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4816551
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR9786444
|
Sensitive
|
lineage4.8
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR3468544
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR9119138
|
RR-TB
|
M.canetti;lineage4.3.1;lineage4.9
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR3283016
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
ERR5311082
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR5311089
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675464
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
SRR6045948
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR13423544
|
Other
|
lineage4.5
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR4188350
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
SRR1173767
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
ERR176766
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
ERR323055
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
SRR13861332
|
Other
|
lineage4.9
|
None
|
SRR26399658
|
Sensitive
|
lineage2.2.1
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
SRR23961549
|
Other
|
La1.2
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR9119388
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR323038
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6045233
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR212001
|
HR-TB
|
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR1173453
|
Other
|
lineage4.4.1.1
|
None
|
SRR3675243
|
Other
|
lineage4.9
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
SRR3675545
|
Other
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR6866807
|
Other
|
lineage4.9
|
None
|
SRR13861510
|
Other
|
lineage4.9
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4188342
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3468607
|
Other
|
lineage4.9
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
ERR387051
|
Other
|
lineage4.9
|
None
|
SRR3675506
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311083
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR5341313
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR1183049
|
RR-TB
|
lineage2.2
|
None
|
ERR5311081
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR772255
|
MDR-TB
|
lineage2.1;lineage4.3.2
|
None
|
ERR5162090
|
RR-TB
|
lineage4.9
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
ERR5311100
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1166821
|
Other
|
lineage4.1.2.1
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6045219
|
HR-TB
|
lineage4.9
|
None
|
ERR4817692
|
HR-TB
|
lineage1.1.2;lineage4
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
ERR5917710
|
Other
|
lineage4.1.2.1
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR3675481
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675561
|
Other
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR3675515
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
SRR6045290
|
RR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
SRR6046594
|
Sensitive
|
lineage4.9
|
None
|
SRR3675450
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
SRR29050859
|
Other
|
lineage4.9
|
None
|
ERR6358991
|
HR-TB
|
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
|
None
|
SRR1510066
|
RR-TB
|
lineage1.2.1.2.1
|
None
|
ERR5908228
|
RR-TB
|
lineage4.3.3
|
None
|
ERR7821163
|
Other
|
lineage2.2.1
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3283018
|
HR-TB
|
lineage4.9
|
None
|
SRR6046485
|
Other
|
lineage4.9
|
None
|
SRR27450264
|
Sensitive
|
lineage2.2.1
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4814536
|
MDR-TB
|
M.canetti;lineage2.1;lineage3
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
SRR14066533
|
Sensitive
|
lineage1.1.1
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR212033
|
Other
|
lineage4.9
|
None
|
ERR473314
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4830374
|
Sensitive
|
lineage2.2.1
|
vn
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3801503
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR3675539
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR3675487
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR12006550
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR3675558
|
HR-TB
|
M.canetti;lineage4.1.1.3;lineage6.3;lineage8
|
None
|
SRR6046382
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1640750
|
Other
|
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR3675444
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
ERR3283042
|
Other
|
lineage4.9
|
None
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
ERR323063
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
ERR9119443
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2693242
|
RR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
SRR6046514
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
ERR4830434
|
Sensitive
|
lineage2.2.1
|
vn
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR3675482
|
Other
|
lineage4.9
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
ERR323036
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|