lineage | Count |
---|---|
lineage3 | 1 |
La1 | 1 |
58 | |
lineage2.2 | 2 |
lineage4.6.2.2 | 4 |
lineage5.2 | 2 |
lineage4.8;lineage4.1 | 1 |
lineage4 | 5 |
lineage4.1.2.1 | 1 |
lineage4.3.3 | 2 |
lineage4.9 | 3 |
lineage2.2.1 | 3 |
lineage3.1 | 1 |
lineage2 | 1 |
lineage4.3.4 | 1 |
spoligotype | Count |
---|---|
None | 86 |
ID | Drug resistance | Lineage | Country iso2 | ERR4800341 | Other | lineage3 | None | ERR4798262 | HR-TB | La1 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR702404 | HR-TB | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | SRR1169098 | Other | lineage4 | None | ERR9786843 | Other | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1172951 | Other | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173153 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173363 | HR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173778 | Other | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1173788 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR15368973 | Other | None | SRR1196768 | MDR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12142341 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675234 | Other | None | SRR3675555 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4816656 | HR-TB | None | ERR212123 | Other | None | SRR3742665 | HR-TB | None | SRR3675574 | HR-TB | None | ERR2693230 | Other | None | SRR5341333 | HR-TB | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | ERR2514692 | Other | None | ERR2693231 | Other | None | SRR6045503 | HR-TB | None | ERR2693254 | Other | None | SRR6045555 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR3283024 | Other | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3797014 | Other | None | ERR3283032 | HR-TB | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797036 | HR-TB | None | ERR387051 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None |
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