Rv0486 - c.417C>G
Drug resistance types
32 Sensitive
1 RR-TB
22 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 11 |
| lineage3 | 1 |
| lineage4.9 | 45 |
| lineage6.1.3 | 1 |
| lineage4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.3.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.1.2 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.8 | 2 |
| lineage4.3.4.1 | 1 |
| 1 | |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 82 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR4798099 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR29096685 | Sensitive | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR28351342 | HR-TB | lineage2.2.1;lineage4 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096935 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR29096527 | Sensitive | lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR29096225 | Sensitive | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR13264981 | Sensitive | La1.7;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR29096873 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR1063896 | Sensitive | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None |
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