Rv0668 - c.1216_1218delCTCinsTTG
Drug resistance types
7 Sensitive
1 RR-TB
11 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 12 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage3 | 2 |
| lineage2.2.1 | 2 |
| 1 | |
| lineage4.6.1.1 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.8 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 31 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1063849 | HR-TB | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR7535086 | Other | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR6866807 | Other | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
|---|
