Rv2245 - c.549T>C


Drug resistance types
19 Sensitive 18 RR-TB 89 HR-TB 48 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 62 Other
lineage Counts
lineage Count
La3;M.canetti;lineage2.1;lineage4.9 12
lineage3 4
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1 15
lineage2.1;lineage4.9 6
lineage4.9 57
La1.2;La1.8.1 1
lineage4.1.1.3 2
M.canetti;lineage2.1;lineage4.9 23
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.1.2.1 8
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage1.1.2 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.2.1.1 2
M.canetti;lineage2.1 1
lineage4.6.3;lineage4.9 2
2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1;lineage4.9 1
M.canetti;lineage4.9 4
lineage4.8;lineage4.9 2
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.3.4.2.1 1
La3;M.canetti;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
lineage6.1.1 2
lineage4.8 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
lineage4.3.2.1 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La1.7.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.4.1.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.3.3 2
La3;M.canetti;lineage3.1 1
lineage4.2;lineage4.9 2
La1.7;M.canetti;lineage4.9 1
La1.6;lineage4 1
La1.8.1 2
lineage2.1;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage2.2 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
lineage2.1;lineage4.3.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.9 1
lineage1.1.2;lineage4 1
lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 2
lineage4 2
La2;lineage4.9;lineage9 1
lineage4.1.2.1.1 1
La1;lineage4.1.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage1.1.1;lineage4 1
La1.2.BCG 1
M.canetti;lineage2.1;lineage3 1
lineage1.1.1 1
La1.7;lineage4.9 1
La1.7.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 240
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR7240033 Other La1.2;La1.8.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR11465665 Other lineage4.1.1.3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR12416842 HR-TB lineage4.9 None
ERR4798139 RR-TB lineage1.1.2 None
SRR18715140 Pre-XDR-TB lineage2.2.1 None
SRR1180172 Other lineage2.2.1 None
SRR29050859 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR987722 MDR-TB None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4769497 Other La1;lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3275196 Other lineage2.2.1 nl
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR4819241 Other lineage4.9 None
SRR13861510 Other lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR4818929 HR-TB lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR28351584 HR-TB lineage2.2.1 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR2514327 HR-TB lineage4.8 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797083 RR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR702405 Sensitive lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR4798099 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6045526 Other lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR736856 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675461 RR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR5917710 Other lineage4.1.2.1 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR108471 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR5341453 Other lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176751 Other lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3799304 Other lineage6.1.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13861332 Other lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2509673 Other lineage2.2.1 None
SRR1162864 Other lineage4.1.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
SRR26399239 Sensitive lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR8665994 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR1162740 Other lineage4.1.2.1 None
SRR1166821 Other lineage4.1.2.1 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2446566 Other lineage4.9 None
SRR13861381 HR-TB lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR124636 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR3675248 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR1791696 Other La1.8.1 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR2229143 RR-TB lineage4.9 None
ERR3283044 Other lineage4 None
ERR3283032 Other lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4816478 HR-TB lineage4 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR3675441 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR9971112 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR4798262 HR-TB La1.2.BCG None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14066533 Sensitive lineage1.1.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11252664 Other lineage2.2.1 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240492 HR-TB La1.7.1 None
SRR13861168 RR-TB lineage4.9 None
SRR1640750 Other None
SRR17832802 HR-TB lineage3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None