Rv2245 - c.549T>C


Drug resistance types
41 Sensitive 4 RR-TB 104 HR-TB 14 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 58 Other
lineage Counts
lineage Count
lineage4 33
lineage4.8 1
96
lineage2.2.1 17
lineage4.9 25
lineage4.9;lineage2.1 1
lineage3 4
lineage4.1.2.1 8
lineage1.1 1
lineage2.1 2
lineage4.1.1.3 2
lineage3.1 2
La2 1
lineage4.1.2 2
lineage4.3.2.1 1
lineage4.3.4.2.1 1
La1 2
La1.8.1 3
lineage6.1.1 2
La1.2 1
lineage1.1.2 1
lineage3.1.2 1
lineage2.2 1
lineage4.3.3 2
lineage2.2.2 2
lineage4.3.4 1
lineage4.1.2.1.1 1
lineage4.3.2 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage2 1
lineage2.2.1.1 2
lineage4.4.1.1 2
lineage1.1.1 1
lineage4.1 2
lineage3;lineage2.1 1
lineage4;lineage1.1.2 1
lineage4.1.1 1
spoligotype Counts
spoligotype Count
None 227
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341299 Sensitive lineage4 None
SRR5341425 Other lineage4 None
ERR2514327 HR-TB lineage4.8 None
ERR1035138 MDR-TB None
SRR5341308 Sensitive lineage4 None
ERR2514692 Other None
ERR2693231 Other None
ERR2446563 Other lineage2.2.1 nl
ERR6359082 Other lineage4.9 None
SRR5341469 Other lineage4 None
ERR2693230 Other None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
SRR5341470 HR-TB None
SRR6045503 HR-TB None
ERR2693254 Other None
SRR6045526 HR-TB None
ERR2693257 Other None
SRR6044875 HR-TB lineage4.9 None
SRR6045519 HR-TB None
SRR6046152 Other lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6045327 HR-TB None
ERR2693232 Other lineage4.9 None
SRR6045010 Other lineage4 None
SRR6045952 HR-TB None
SRR6325442 HR-TB None
ERR278594 HR-TB None
SRR6046514 HR-TB None
SRR6046397 Other None
SRR6325444 HR-TB None
SRR6046259 Sensitive lineage4.9 None
SRR6325448 HR-TB None
SRR6046644 HR-TB None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6325447 HR-TB None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6511621 HR-TB None
ERR3077978 Other lineage1.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR502510 Sensitive lineage4 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR11465665 Other lineage4.1.1.3 None
ERR294248 HR-TB None
ERR4831638 Sensitive None
ERR294266 HR-TB None
ERR323036 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR323038 HR-TB None
ERR502524 HR-TB La2 None
ERR5311099 HR-TB None
ERR5311081 HR-TB None
SRR9970980 Other lineage4.1.2 None
ERR5311090 HR-TB None
SRR7535082 Sensitive lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971112 Other lineage2.2.1 None
ERR323045 HR-TB None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323039 HR-TB None
ERR323041 HR-TB None
SRR7796666 Pre-XDR-TB lineage2.2.1 None
ERR323054 HR-TB lineage3.1 None
ERR323055 HR-TB None
ERR323053 HR-TB None
ERR323085 Sensitive lineage4 None
ERR323066 Sensitive lineage4 None
ERR323063 HR-TB None
ERR067699 HR-TB lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1063858 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1035122 Sensitive None
ERR1063862 HR-TB None
ERR1063859 HR-TB None
ERR3283010 Other La1 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR108471 HR-TB lineage4 None
ERR133825 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR137286 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283017 HR-TB None
ERR3445503 HR-TB None
ERR3283040 HR-TB None
ERR3283024 Other None
ERR3283032 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3797016 HR-TB None
ERR3468544 HR-TB None
ERR3797044 Other None
ERR3797015 HR-TB None
ERR3797014 Other None
ERR3797017 Other None
ERR3797023 HR-TB La1.8.1 None
ERR3799304 Other lineage6.1.1 None
ERR3797081 Sensitive lineage4 None
ERR3797083 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3797061 Other None
ERR3797082 Other lineage4.9 None
ERR4796254 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR4024991 Other None
ERR4769497 HR-TB La1.2 None
ERR4188350 HR-TB None
ERR473332 Other lineage4 None
ERR4797264 Sensitive None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797474 Other None
ERR4798139 Sensitive lineage1.1.2 None
ERR4798099 Other None
ERR4798262 HR-TB La1 None
ERR4798504 Other lineage3 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4799025 Pre-XDR-TB None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799378 Sensitive lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4810624 HR-TB lineage2.2 None
ERR5917710 Other lineage4.1.2.1 None
ERR4811030 Sensitive None
ERR5908228 Other lineage4.3.3 None
ERR736834 Sensitive lineage4 None
ERR6359045 HR-TB None
ERR6866022 Other None
ERR5987197 Pre-XDR-TB lineage2.2.2 None
ERR6358837 HR-TB None
ERR6866639 Other None
ERR736817 HR-TB lineage4.3.4 None
ERR736839 Other None
ERR736835 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736875 HR-TB lineage4 None
ERR736865 HR-TB None
ERR736872 Sensitive lineage4 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR751326 Sensitive lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR9119096 Other lineage4.3.3 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR987722 HR-TB None
ERR8976043 HR-TB None
ERR9119669 HR-TB None
SRR069981 HR-TB lineage2.2.2 None
SRR069989 HR-TB lineage2 None
SRR10809074 Sensitive lineage4 None
SRR10315567 Other lineage2.2.1 None
SRR10808805 Sensitive None
SRR1158918 Sensitive lineage4 None
SRR1162740 Other lineage4.1.2.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1173633 HR-TB lineage4.9 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR13861168 RR-TB lineage4.9 None
SRR13861224 Sensitive lineage4.9 None
SRR13861304 Other lineage4.9 None
SRR13861381 MDR-TB lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR13861418 HR-TB lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR13861510 Other lineage4.9 None
SRR13861629 RR-TB lineage4.9 None
SRR17832802 HR-TB lineage3 None
SRR14782405 HR-TB None
SRR17658565 Other lineage3 None
SRR1640750 HR-TB None
SRR26399239 Sensitive lineage4.9 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR1791696 Other La1.8.1 None
SRR18715140 Pre-XDR-TB lineage2.2.1 None
SRR3675464 HR-TB lineage4.1 None
ERR176779 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675482 HR-TB None
SRR3675486 HR-TB None
SRR6325445 HR-TB None
ERR1035239 HR-TB None
ERR161033 HR-TB None
ERR702405 Sensitive lineage2.1 None
SRR3675383 HR-TB None
SRR3675246 Sensitive lineage4 None
ERR181824 HR-TB lineage4 None
SRR3675312 HR-TB lineage4 None
ERR1750908 Sensitive lineage4 None
SRR3675234 Other None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR3675510 Other None
ERR212034 HR-TB None
SRR3675558 HR-TB None
ERR212121 HR-TB None
ERR4816466 HR-TB None
ERR176740 HR-TB None
ERR176751 HR-TB None
SRR3675545 HR-TB None
SRR3675574 HR-TB None
SRR3675571 HR-TB None
ERR4816656 HR-TB None
SRR5341384 Sensitive lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
ERR2446566 Other lineage4.1 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4818110 Sensitive lineage4.9 None
ERR2229143 Other lineage4.1.1 None
ERR2509673 Other lineage2.2.1 None
ERR4818929 HR-TB None
ERR4818607 Sensitive lineage4.9 None
SRR5341453 Sensitive None