Rv3793 - c.1212G>C
Drug resistance types
1 Sensitive
1 RR-TB
32 HR-TB
8 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 32 |
| lineage4.3.4.2.1 | 1 |
| La2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage3 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2 | 1 |
| La2;lineage2.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage2.2.1 | 2 |
| lineage4.2;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La1.2.BCG | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816466 | HR-TB | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR6045555 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR16156817 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4797474 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None |
|---|
