lineage | Count |
---|---|
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.9 | 5 |
lineage4 | 2 |
26 | |
lineage4.1.2.1 | 3 |
lineage1.2.2.2 | 1 |
La2 | 1 |
lineage3 | 4 |
lineage6.1.1 | 2 |
lineage3.1.2 | 1 |
lineage4.6.1.1 | 2 |
lineage4.9.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage2.2.1 | 6 |
lineage2.2.1.1 | 4 |
lineage2.2.1;lineage1.1 | 1 |
lineage2.2;lineage1.1.2 | 1 |
lineage2.2 | 1 |
spoligotype | Count |
---|---|
None | 64 |
ID | Drug resistance | Lineage | Country iso2 | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR4814331 | Sensitive | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | ERR176740 | HR-TB | None | ERR4816656 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3675510 | Other | None | ERR212001 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | SRR6045519 | HR-TB | None | ERR4818929 | HR-TB | None | SRR6045526 | HR-TB | None | SRR2100223 | Sensitive | lineage4.1.2.1 | None | SRR5341470 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | ERR294266 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046886 | HR-TB | lineage1.2.2.2 | None | SRR7535086 | Other | None | ERR502524 | HR-TB | La2 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR117656 | Sensitive | lineage4.1.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797036 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR736839 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR245758 | Other | lineage4.9.1 | None | ERR6359045 | HR-TB | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR736865 | HR-TB | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | ERR990545 | Other | lineage3 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR1172310 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1180225 | Pre-XDR-TB | lineage2.2.1;lineage1.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183047 | Pre-XDR-TB | lineage2.2;lineage1.1.2 | None | SRR1183049 | Other | lineage2.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR17658565 | Other | lineage3 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None |
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