Rv3596c - c.123G>T
Drug resistance types
12 Sensitive
10 RR-TB
25 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.9 | 31 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.2.1 | 5 |
| 1 | |
| lineage4.3.4.2.1 | 1 |
| La3;lineage4.9 | 7 |
| lineage4.1.2.1 | 1 |
| lineage3 | 3 |
| M.canetti;lineage1 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.9 | 3 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4 | 3 |
| M.canetti;lineage4.9 | 1 |
| lineage4.8 | 2 |
| lineage4.6.5 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR212001 | HR-TB | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR6046492 | Other | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR10808730 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR6045053 | Other | lineage4 | None | SRR6045795 | Other | lineage2.2.1 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR15014682 | MDR-TB | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR6046878 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR6045347 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797063 | Other | La3;lineage4.9 | None |
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