Rv3596c - c.123G>T


Drug resistance types
12 Sensitive 10 RR-TB 25 HR-TB 8 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 23 Other
lineage Counts
lineage Count
lineage4.9 31
La1.7.X-unk4;lineage4.9 1
lineage4.6.5 1
La3;lineage4.9 7
lineage4.8 2
lineage4 3
La1.2;La1.8.1 1
M.canetti;lineage1 1
M.canetti;lineage4.2;lineage4.9 1
La1.7.1;lineage4.9 1
lineage3 3
lineage4.9;lineage7 1
lineage4.2;lineage4.9 3
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.2.1 5
1
M.canetti;lineage4.9 1
lineage4.1.2.1 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9 1
lineage2.2.1.2;lineage7 1
La1.7;M.canetti;lineage4.9 1
lineage2.2.1.1 2
M.canetti;lineage4.9;lineage9 1
lineage4.4.1.1.1 1
lineage2.2.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7;lineage4.9 2
lineage4.3.4.2.1 1
spoligotype Counts
spoligotype Count
None 79
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675270 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
SRR6046141 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR6045347 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR7240033 Other La1.2;La1.8.1 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR10808730 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR212001 HR-TB None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR4769439 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797063 Other La3;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
ERR4818710 Sensitive lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR4816964 HR-TB lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR15014682 MDR-TB lineage4.8 None
ERR3797048 Other La3;lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR9119669 MDR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4816470 HR-TB lineage3 None
ERR1063849 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR3283040 HR-TB lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR1238558 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
SRR6045795 Other lineage2.2.1 None
SRR20632814 Sensitive lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR6359070 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None