Rv3596c - c.123G>T
Drug resistance types
29 Sensitive
3 RR-TB
45 HR-TB
7 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| 26 | |
| lineage4 | 23 |
| lineage4.9 | 34 |
| lineage3 | 3 |
| lineage2.2.1 | 9 |
| lineage4.1.2.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.3.4 | 1 |
| lineage4.8 | 4 |
| lineage2.2.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.2.1 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 116 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283031 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359070 | Other | lineage4.9 | None | ERR4811493 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9119669 | HR-TB | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR15014682 | MDR-TB | lineage4.8 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | ERR2229795 | Sensitive | lineage4.8 | None | ERR4814331 | Sensitive | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675270 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819051 | Other | lineage4 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819765 | Other | lineage4.1 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045399 | Other | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6046046 | Other | None | ERR4828477 | Other | lineage2.2.1 | None | SRR6046397 | Other | None | ERR4828463 | HR-TB | lineage2.2.1 | vn | SRR6046225 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR4828679 | Sensitive | lineage2.2.1 | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR294266 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323108 | HR-TB | lineage4 | None | SRR8600210 | Other | La1.8.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None |
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