Rv0407 - c.189A>G


Drug resistance types
13 Sensitive 5 RR-TB 27 HR-TB 17 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 30 Other
lineage Counts
lineage Count
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.9 38
lineage4.9;lineage9 3
lineage3.1.2.2 1
lineage3 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
3
M.canetti;lineage2.2 2
lineage4.3.2;lineage4.9 1
lineage2.2.1 1
M.canetti;lineage4.6.4;lineage4.9 2
La3;lineage4.9 2
lineage6.1.1 2
lineage2.2 1
La2;lineage4.9 2
La2;lineage4.9;lineage9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.9 2
lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;lineage4.3.4 1
M.canetti;lineage1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage2.1;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
M.canetti;lineage4.9;lineage9 1
La3;lineage2.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 94
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR349300 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR349265 Other lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4815441 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4819877 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR363445 Other lineage4.9 None
ERR363502 Other lineage4.9 None
ERR176751 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR9786843 Other None
ERR987722 MDR-TB None
ERR212001 HR-TB None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819422 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR6866807 Other lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR369158 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1183049 RR-TB lineage2.2 None
ERR4820773 HR-TB lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6044942 HR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4817731 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR369163 Sensitive lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6046210 Other lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR363490 Sensitive lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR161037 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4816656 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR373947 Other lineage4.9 None
ERR349266 Sensitive lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4819241 Other lineage4.9 None
ERR369162 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None