Rv1630 - c.1269C>T
Drug resistance types
36 Sensitive
0 RR-TB
25 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage2.2.1 | 5 |
| lineage4.9 | 39 |
| lineage4.3.2.1 | 2 |
| La3;lineage4.9 | 8 |
| lineage4 | 4 |
| La1.2;La1.8.1 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage3.1.3 | 2 |
| lineage2.2 | 2 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage3 | 3 |
| lineage1.2.2.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.2.BCG;lineage4.9 | 1 |
| La1.2.BCG | 2 |
| lineage1.1.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 84 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR552579 | Sensitive | lineage3.1.3 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR11043932 | Sensitive | lineage3.1.3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None |
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