Rv3601c - c.105C>G


Drug resistance types
20 Sensitive 2 RR-TB 29 HR-TB 6 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 35 Other
lineage Counts
lineage Count
lineage4.9 30
lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 5
lineage4.1 4
lineage2.1;lineage4.9 3
3
lineage2.1;lineage6.3 2
lineage4.1.2 1
lineage4 2
La1.7;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 5
lineage2.1 2
lineage3 2
La3;lineage2.1;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
La3;lineage2 1
La3;lineage4.9 2
La2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage3.1.2.2 1
lineage4.1.1.1 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.2.1 2
lineage2.2.1.1 1
lineage2.2.2;lineage4 1
lineage4.2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage2.1;lineage4.9 2
lineage4.1.1.3 1
lineage4.9;lineage9 2
lineage2.2.1;lineage6.3 1
lineage4.3.2.1 1
La1.7.1;lineage4.9 1
lineage1.1.3.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 93
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1183111 HR-TB lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR28119805 Other lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR29539488 Sensitive lineage4.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR1063896 Sensitive None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4797184 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR17832802 HR-TB lineage3 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR6832230 Sensitive lineage4.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR502511 Sensitive lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR29681464 Sensitive lineage4.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR176793 Other lineage4.1.1.1 None
SRR3675236 Other None
ERR3283044 Other lineage4 None
ERR4800341 Other lineage3 None
SRR8217918 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR779852 Sensitive lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
ERR3283018 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR987722 MDR-TB None
SRR28119752 Other lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR176778 HR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR3283042 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176651 Other lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR6831985 Sensitive lineage4.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR702405 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR124636 Sensitive lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR161037 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None