Rv3596c - c.1728G>C
Drug resistance types
23 Sensitive
1 RR-TB
3 HR-TB
7 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 5 |
| lineage4.9 | 23 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage5.2 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.8 | 2 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR550637 | MDR-TB | lineage4.1.1.3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4816151 | Sensitive | lineage4.8 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR2199988 | MDR-TB | lineage4.1.1.3 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None |
|---|
