lineage | Count |
---|---|
lineage4 | 34 |
86 | |
lineage4.1.2 | 1 |
lineage4.9 | 9 |
lineage2 | 3 |
lineage3 | 1 |
lineage4.6.1.1 | 1 |
lineage1.1.2 | 2 |
lineage4.3.3 | 1 |
lineage2.2.1.1 | 2 |
lineage2.2.1 | 10 |
lineage3.1 | 1 |
lineage4.5 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.9;La3 | 1 |
lineage2.1 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2 | 1 |
lineage4.8;La3 | 1 |
La1.8.1 | 1 |
lineage4.1.1.2 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.9;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 164 |
ID | Drug resistance | Lineage | Country iso2 | SRR7535082 | Sensitive | lineage4 | None | ERR1034652 | Other | None | ERR323043 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | SRR7535086 | Other | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR067681 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR1035122 | Sensitive | None | ERR133986 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1063896 | Sensitive | None | ERR3283036 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR3283027 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR3797069 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4810741 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR702404 | HR-TB | None | ERR5336148 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358991 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6866410 | Sensitive | None | ERR736872 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736867 | HR-TB | None | ERR702406 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1172234 | Other | None | SRR1169194 | Other | None | SRR1172817 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1173118 | Other | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173568 | Other | lineage4.9 | None | SRR1173484 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1175074 | MDR-TB | None | SRR1173706 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1184380 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196494 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR15368973 | Other | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR19304036 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR19303884 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR25827682 | Other | None | SRR20969677 | HR-TB | lineage2 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR4815604 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675236 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675312 | HR-TB | lineage4 | None | ERR176751 | HR-TB | None | ERR4817060 | RR-TB | None | ERR4816999 | Other | None | SRR3675571 | HR-TB | None | SRR3675572 | Other | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4816656 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4818615 | Other | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818929 | HR-TB | None | ERR234659 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341418 | Other | None | ERR4819280 | Sensitive | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341455 | Sensitive | lineage4 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | SRR5341469 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341333 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045526 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046540 | HR-TB | None | SRR6046397 | Other | None | ERR502510 | Sensitive | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | SRR6046824 | HR-TB | None | ERR502889 | Other | None | ERR502532 | HR-TB | None |
---|