lineage | Count |
---|---|
lineage4 | 2 |
lineage4.9 | 41 |
La1;lineage4.1.2 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
1 | |
lineage4.1.2 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
La1.7;lineage3.1;lineage4 | 1 |
La1;lineage2;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
M.canetti;lineage4.2 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
lineage4.6.4;lineage4.9 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
lineage2.2.1 | 2 |
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
La1;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
lineage4.3.2.1 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
spoligotype | Count |
---|---|
None | 66 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR4816478 | HR-TB | lineage4 | None |
SRR12416842 | HR-TB | lineage4.9 | None |
SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
ERR4797264 | Sensitive | lineage4.9 | None |
ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
ERR323062 | Sensitive | lineage4.9 | None |
ERR4816762 | Sensitive | lineage4.9 | None |
ERR4818929 | HR-TB | lineage4.9 | None |
ERR736872 | HR-TB | lineage4.9 | None |
ERR1063896 | Sensitive | None | |
SRR9970980 | HR-TB | lineage4.1.2 | None |
SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
ERR4798099 | Other | lineage4.9 | None |
SRR5341384 | HR-TB | lineage4.9 | None |
ERR502510 | Sensitive | lineage4.9 | None |
ERR212123 | Other | lineage4.9 | None |
ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None |
ERR124636 | Sensitive | lineage4.9 | None |
ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None |
SRR5341461 | HR-TB | lineage4.9 | None |
SRR6511621 | Sensitive | lineage4.9 | None |
ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
ERR751326 | Other | lineage4.9 | None |
ERR4819877 | HR-TB | lineage4.9 | None |
SRR3675246 | Other | lineage4.9 | None |
SRR5341308 | Sensitive | lineage4.9 | None |
SRR6044835 | Other | lineage4.9 | None |
ERR323085 | Sensitive | lineage4.9 | None |
SRR3675585 | Sensitive | lineage4.9 | None |
SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
ERR4188322 | Other | lineage4.6.4;lineage4.9 | None |
SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
ERR4820773 | HR-TB | lineage4.9 | None |
ERR4831617 | MDR-TB | lineage2.2.1 | None |
ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
ERR067712 | Sensitive | lineage4.9 | None |
ERR161037 | Other | lineage4.9 | None |
ERR4815441 | HR-TB | lineage4.9 | None |
ERR3273109 | HR-TB | lineage4 | None |
ERR4596910 | Sensitive | lineage4.9 | None |
ERR4817731 | HR-TB | lineage4.9 | None |
SRR5341453 | Other | lineage4.9 | None |
ERR1035122 | Sensitive | lineage4.9 | None |
ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
ERR133825 | HR-TB | La1;lineage4.9 | None |
ERR1023509 | Other | lineage4.9 | None |
ERR4816656 | Other | lineage4.9 | None |
SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
ERR736834 | Sensitive | lineage4.9 | None |
ERR4818110 | Sensitive | lineage4.9 | None |
ERR4819422 | HR-TB | lineage4.9 | None |
SRR6045795 | Sensitive | lineage2.2.1 | None |
SRR6045010 | Sensitive | lineage4.9 | None |
ERR4819241 | Other | lineage4.9 | None |
ERR137286 | Other | lineage4.9 | None |
ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
ERR502511 | Sensitive | lineage4.9 | None |
ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
ERR702405 | Sensitive | lineage4.9 | None |
SRR5341300 | HR-TB | lineage4.9 | None |
SRR3675235 | Sensitive | lineage4.9 | None |
ERR4797184 | Sensitive | lineage4.9 | None |
SRR9970981 | RR-TB | lineage4.3.2.1 | None |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |