lineage | Count |
---|---|
27 | |
lineage4 | 40 |
lineage4.9 | 5 |
lineage2.1 | 1 |
lineage4;lineage2 | 1 |
lineage4.1.1.2 | 1 |
lineage3 | 1 |
lineage2.2.1 | 5 |
lineage4.9;lineage2.1 | 1 |
lineage4.1 | 1 |
lineage4.1.2 | 2 |
lineage4.3.2.1 | 1 |
lineage4;lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 87 |
ID | Drug resistance | Lineage | Country iso2 | SRR10808805 | Sensitive | None | SRR10808399 | Sensitive | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR14801749 | Sensitive | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675502 | Other | None | ERR212123 | Other | None | ERR158583 | HR-TB | None | SRR3675550 | Other | None | ERR1035162 | Other | None | ERR4816656 | HR-TB | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4818929 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341418 | Other | None | SRR5341453 | Sensitive | None | SRR5341396 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR1023509 | Other | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045010 | Other | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4 | None | SRR6046824 | HR-TB | None | SRR6511621 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502889 | Other | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323085 | Sensitive | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR133986 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3439432 | Other | None | ERR4024991 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798406 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None |
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