Rv3596c - c.1869G>C
Drug resistance types
9 Sensitive
6 RR-TB
18 HR-TB
4 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| 14 | |
| lineage3.1.2.1 | 1 |
| lineage4 | 12 |
| lineage2.2.1 | 4 |
| lineage4.3.4.2.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage3 | 2 |
| lineage3.1.1 | 1 |
| lineage4.9 | 9 |
| lineage4.7 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.2 | 1 |
| La1.2 | 1 |
| lineage4.6.5 | 2 |
| lineage4.8;lineage4.3.3 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 55 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815310 | Other | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4815550 | Other | lineage4 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4821214 | RR-TB | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046397 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR3283014 | HR-TB | None | SRR7645928 | RR-TB | lineage4.7 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR036207 | Other | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4769418 | Other | La1.2 | None | ERR4796577 | MDR-TB | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692800 | Other | lineage4 | None | SRR8692887 | Other | None | SRR8692899 | Other | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None |
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