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SRA data
Rv0407
- c.249C>G
Drug resistance types
21 Sensitive
3 RR-TB
39 HR-TB
22 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
38
M.canetti;lineage2.1;lineage4.9
10
M.canetti;lineage2.1;lineage4.9;lineage6.3
6
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
4
lineage2.2.1
2
lineage4.1.2
2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
lineage5.2
2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
107
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR11243625
Sensitive
lineage4.8
None
ERR124651
MDR-TB
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR126600
HR-TB
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
None
ERR2512773
Sensitive
lineage4.1.2
gb
ERR2693230
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR2693245
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR2693252
Sensitive
lineage4.9
None
ERR2693257
Other
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
None
ERR3077978
RR-TB
lineage1.1
None
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