lineage | Count |
---|---|
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage1.2.1.1 | 1 |
lineage4.9 | 61 |
lineage2.1 | 1 |
lineage4 | 87 |
29 | |
lineage4.3.4.2.1 | 1 |
lineage4.6.2.2 | 2 |
lineage4.1.1.2 | 1 |
lineage2.2.1 | 11 |
lineage4.9;lineage2.1 | 1 |
lineage4.1.2 | 2 |
lineage4.3.3 | 1 |
lineage4.3.2.1 | 1 |
lineage4.8 | 2 |
lineage4.8.1 | 1 |
lineage4.1.2.1 | 4 |
lineage2.2 | 2 |
lineage1.1.3.1 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage4.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 214 |
ID | Drug resistance | Lineage | Country iso2 | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675265 | Other | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR5341453 | Sensitive | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818405 | Sensitive | lineage4.6.2.2 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR6045439 | Sensitive | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045503 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045892 | Sensitive | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046250 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046225 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502943 | HR-TB | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7496471 | Sensitive | None | SRR8217918 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323066 | Sensitive | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323107 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR1213932 | Sensitive | lineage4.1.2.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283025 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR3283040 | HR-TB | None | ERR349298 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR4024991 | Other | None | ERR400345 | Other | lineage4 | None | ERR4188247 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4797474 | Other | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866022 | Other | None | ERR6358979 | Other | None | ERR6359070 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736837 | Other | lineage4.9 | None | ERR736856 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR6866410 | Sensitive | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR14801749 | Sensitive | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR14088366 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None |
---|