Rv0005 - c.897G>A


Drug resistance types
24 Sensitive 2 RR-TB 109 HR-TB 20 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 70 Other
lineage Counts
lineage Count
115
lineage4.9 29
lineage4 24
lineage2.2.1 8
lineage2.2 4
lineage4.3.3 2
lineage3.1 4
lineage2.2.1.1 1
lineage2 4
lineage4.5 2
lineage2.1 1
lineage4.9;La3 1
lineage3 1
lineage4.1 2
lineage6.3;lineage4.9;lineage2.1 1
lineage6.3;lineage2.2.1 1
lineage4.1.1 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.3.4.2.1 3
lineage3;lineage2.1 1
lineage4.3 1
lineage4.1.1.3 1
lineage5.1.4 1
lineage4.8 1
lineage4.8;La3 1
lineage4.7 1
lineage4.1.2.1 9
lineage1.1 1
lineage1.1.2 1
lineage4.3.2 1
La3 1
lineage4.4.1.1 2
spoligotype Counts
spoligotype Count
None 227
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1175074 MDR-TB None
SRR1175090 Other lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1175507 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR1184294 HR-TB None
SRR1181289 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184381 MDR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184380 HR-TB None
SRR1196546 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR1184388 Other None
SRR11972223 MDR-TB lineage2.2.1.1 None
SRR1196566 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR12142341 HR-TB None
SRR13837684 Sensitive lineage4.9 None
SRR12416824 HR-TB None
SRR15368973 Other None
SRR19304036 HR-TB None
SRR18213713 HR-TB lineage4.5 None
SRR18910194 HR-TB lineage2.2 None
SRR1710057 Other lineage2.1 None
SRR19303884 HR-TB None
SRR26399973 Other lineage4.9;La3 None
ERR11082455 Sensitive lineage3 None
SRR12708416 Sensitive lineage4.1 None
SRR20969677 HR-TB lineage2 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR3675473 Sensitive lineage4.9 None
ERR4815604 HR-TB None
SRR3675477 Other lineage4.9 None
SRR3675464 HR-TB lineage4.1 None
SRR3675465 HR-TB None
ERR176793 Other lineage4.1.1 None
SRR6325445 HR-TB None
ERR1035239 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675482 HR-TB None
SRR3675488 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR161033 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675486 HR-TB None
SRR3675229 Other lineage4 None
SRR3675221 HR-TB None
ERR3275450 Other lineage4 None
SRR3675501 HR-TB None
SRR3675266 Sensitive lineage4.9 None
SRR3675236 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675522 Other None
SRR3675455 Sensitive lineage4 None
SRR3675514 Sensitive lineage4.9 None
SRR3675279 Other None
ERR176643 HR-TB None
SRR3675383 HR-TB None
SRR3675387 Sensitive None
ERR2027263 Other lineage4 None
ERR4816999 Other None
SRR3675541 Sensitive lineage4.9 None
ERR212001 HR-TB None
SRR3675545 HR-TB None
SRR3675574 HR-TB None
ERR212033 HR-TB None
ERR4817060 RR-TB None
SRR3675558 HR-TB None
SRR3742665 HR-TB None
ERR4816466 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816585 Other lineage2.2 None
ERR2513283 Other lineage5.1.4 None
ERR4817735 Other lineage4.8 None
ERR4817893 Other lineage4.8;La3 None
ERR234659 HR-TB None
ERR4818615 Other None
SRR5341396 Other lineage4 None
ERR2517475 Other lineage4 None
ERR4819781 Other lineage2.2.1 None
SRR5341302 HR-TB None
ERR4819932 Other lineage4.7 None
ERR2446382 Other lineage4 None
SRR5341345 Sensitive lineage4.9 None
SRR5341333 HR-TB None
ERR4820854 Other lineage4.1.2.1 None
SRR6045526 HR-TB None
ERR2693239 HR-TB None
ERR278594 HR-TB None
SRR5535933 HR-TB None
SRR6044790 HR-TB None
SRR6044819 Sensitive lineage4.9 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6046225 HR-TB None
SRR6044835 Sensitive lineage4 None
SRR6044876 Sensitive lineage4 None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
SRR6044855 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6046245 Other lineage4.9 None
SRR6325444 HR-TB None
SRR6046514 HR-TB None
ERR4830353 Other None
SRR6325448 HR-TB None
ERR502943 HR-TB None
SRR6046540 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
ERR4831546 HR-TB lineage2.2 None
ERR294248 HR-TB None
SRR6325447 HR-TB None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6325442 HR-TB None
ERR3077978 Other lineage1.1 None
ERR323034 HR-TB lineage3.1 None
SRR6831950 Other lineage4.3.3 None
SRR6785267 Other lineage2.2.1 None
SRR6789626 Other None
ERR323036 HR-TB None
ERR502532 HR-TB None
ERR5311090 HR-TB None
ERR5311099 HR-TB None
ERR5311081 HR-TB None
ERR323038 HR-TB None
SRR7535086 Other None
SRR7131023 Other lineage4.1.2.1 None
ERR323041 HR-TB None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323055 HR-TB None
ERR323043 HR-TB None
ERR1063855 Other lineage4 None
ERR323054 HR-TB lineage3.1 None
ERR323115 Sensitive lineage4 None
ERR1035157 Other lineage4.9 None
ERR323063 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR3797016 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR3283017 HR-TB None
ERR3283036 HR-TB None
ERR3283027 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3468544 HR-TB None
ERR3797069 Other None
ERR3797083 HR-TB None
ERR4188350 HR-TB None
ERR400326 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR400320 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR473334 HR-TB lineage4.9 None
ERR4407463 HR-TB None
ERR4423501 MDR-TB lineage4.9 None
ERR4423500 MDR-TB lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4769474 HR-TB lineage4 None
ERR4797313 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR6358837 HR-TB None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811030 Sensitive None
ERR4811142 MDR-TB None
ERR6052087 MDR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4811105 HR-TB None
ERR4812155 Sensitive None
ERR6052042 MDR-TB lineage4.9 None
ERR6362120 MDR-TB lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6358979 Other None
ERR736839 Other None
ERR702404 HR-TB None
ERR6866410 Sensitive None
ERR702406 HR-TB None
ERR9119699 MDR-TB lineage4.9 None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR8976043 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR772255 MDR-TB lineage4.3.2 None
ERR8774149 MDR-TB lineage4.9 None
ERR8774151 MDR-TB lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9786843 Other None
SRR1165506 Other lineage4.1.2.1 None
SRR069989 HR-TB lineage2 None
SRR1163221 HR-TB lineage4.1.2.1 None
ERR9787197 Other None
SRR1165584 Other lineage4.1.2.1 None
SRR1169306 Other None
SRR1167055 Other lineage4.1.2.1 None
SRR1167384 Other lineage4 None
SRR1169194 Other None
SRR1169249 Other La3 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1173118 Other None
SRR1172234 Other None
SRR1172728 MDR-TB None
SRR1172951 Other None
SRR1172817 HR-TB None
SRR1172857 MDR-TB None
SRR1173384 Other lineage4 None
SRR1173166 Other lineage4.9 None
SRR1173363 HR-TB None
SRR1173153 HR-TB None
SRR1173484 Other lineage4 None
SRR1173400 Other None
SRR1173453 Other lineage4.4.1.1 None
SRR1173633 HR-TB lineage4.9 None
SRR1173562 HR-TB lineage4 None
SRR1173706 Other lineage4.9 None
SRR1173629 Other None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1173788 Other None
SRR1173778 Other None
SRR1175049 RR-TB None