Rv0407 - c.180T>C
Drug resistance types
44 Sensitive
1 RR-TB
72 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| 83 | |
| lineage4.1.2.1 | 3 |
| lineage4.9 | 9 |
| lineage2.2.1 | 6 |
| lineage4 | 43 |
| lineage2.2 | 4 |
| lineage1.1.2 | 1 |
| lineage3.1 | 2 |
| lineage4.6.2.2 | 2 |
| La1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8;lineage4.1 | 1 |
| La3 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 163 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816656 | HR-TB | None | ERR1035162 | Other | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | None | SRR5341418 | Other | None | ERR2693239 | HR-TB | None | ERR2693231 | Other | None | ERR2693254 | Other | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6044838 | Other | lineage4.9 | None | ERR278594 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046460 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045399 | Other | None | SRR6046245 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6325448 | HR-TB | None | ERR323036 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6325442 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6046824 | HR-TB | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR502943 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323055 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR133986 | HR-TB | None | ERR1034652 | Other | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283024 | Other | None | ERR3283058 | Other | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3439432 | Other | None | ERR3468544 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR373946 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR3797083 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR400320 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR4798406 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR6359045 | HR-TB | None | ERR4811030 | Sensitive | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR8976043 | HR-TB | None | ERR7910942 | MDR-TB | lineage4.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | SRR1167384 | Other | lineage4 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR13861372 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR3675502 | Other | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675488 | HR-TB | None | ERR1750938 | Other | lineage4.4.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675234 | Other | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675383 | HR-TB | None | ERR176643 | HR-TB | None | ERR212001 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | SRR3675558 | HR-TB | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None |
|---|
