Rv0001 - c.987C>T


Drug resistance types
7 Sensitive 0 RR-TB 3 HR-TB 5 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 8 Other
lineage Counts
lineage Count
lineage4.9 3
La1.2 1
lineage2.1;lineage4.9;lineage7 1
lineage2.2.1 2
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage4.9 1
lineage1.1.3.1 1
lineage4.9;lineage7 2
M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.5 2
M.canetti;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 23
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045892 Sensitive lineage4.9 None
SRR23961549 Other La1.2 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1723910 Sensitive lineage4.5 cn
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR13285068 Sensitive lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR2179586 Sensitive lineage4.5 cn
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045795 Sensitive lineage2.2.1 None
ERR387051 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None