Rv0005 - c.939C>T
Drug resistance types
46 Sensitive
1 RR-TB
35 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1.1 | 1 |
| 34 | |
| lineage2.2.1 | 3 |
| lineage4 | 47 |
| lineage2.2 | 4 |
| lineage4.9 | 18 |
| La1.8.1 | 1 |
| lineage4.1.2.1 | 3 |
| La3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 117 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR067681 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | SRR7496471 | Sensitive | None | ERR1063857 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283014 | HR-TB | None | ERR133986 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283028 | Other | None | ERR3439432 | Other | None | ERR363437 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797067 | Other | La1.8.1 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4799025 | Pre-XDR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR403298 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6359070 | Other | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6865502 | Sensitive | lineage4 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR736837 | Other | lineage4.9 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR14782405 | HR-TB | None | SRR1183145 | Other | lineage2.2.1 | None | SRR8692825 | Other | lineage4.9 | None | ERR8025519 | Pre-XDR-TB | lineage2.2.2 | None | SRR8692905 | HR-TB | None | SRR21676520 | Sensitive | lineage4.1 | None | SRR8692807 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR8692887 | Other | None | SRR3675502 | Other | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR158583 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | ERR212033 | HR-TB | None | ERR176643 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675550 | Other | None | ERR176751 | HR-TB | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR11049244 | Sensitive | lineage4 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR5341456 | Other | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | ERR1035162 | Other | None | ERR4819933 | Other | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341418 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045503 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045010 | Other | lineage4 | None | SRR6046482 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046299 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046824 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None |
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