Rv0005 - c.939C>T


Drug resistance types
35 Sensitive 4 RR-TB 11 HR-TB 13 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 32 Other
lineage Counts
lineage Count
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2 2
La3;lineage2.1;lineage4.9 1
La1.8.1 1
lineage4.1.1.3 2
La3;lineage4.9 12
M.canetti;lineage4.2;lineage4.9 1
lineage4.9 43
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.1 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage2.2.1 1
lineage4.1.2.1 2
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9.1 1
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage2.2.2 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La2;lineage4.9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4 1
lineage4.2;lineage4.6.3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 96
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3797067 Other La1.8.1 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR3797048 Other La3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4819051 Sensitive lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR373947 Other lineage4.9 None
SRR21676520 Other lineage4.1 None
ERR373946 Sensitive lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR6866807 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR363500 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR369163 Sensitive lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR926160 Sensitive lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR363445 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR6044835 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR926155 Sensitive lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR926157 Sensitive lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR3283011 Other La3;lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR11049244 Sensitive lineage4 None
ERR11252612 Other La3;lineage4.9 None
ERR369159 Sensitive lineage4.9 None
SRR29055652 Sensitive lineage4.1 None
ERR349330 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None