Rv3696c - c.195G>A
Drug resistance types
2 Sensitive
2 RR-TB
24 HR-TB
16 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.8 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage6.3.1 | 1 |
| lineage4.9 | 24 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.2.1 | 5 |
| lineage4 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| lineage2.1;lineage4.9 | 8 |
| lineage2.2.1;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.1.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| 8 | |
| lineage4.9;lineage6.3 | 5 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La3;lineage1.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage4.2.2.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4817893 | Other | La3;lineage4.8 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR3797069 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR3283044 | Other | lineage4 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR926160 | Other | lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR926155 | Other | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9117709 | Other | None | ERR2514692 | Other | None | SRR18213713 | HR-TB | None | SRR28119805 | Other | lineage4.9 | None | SRR6045795 | Other | lineage2.2.1 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR6045526 | Other | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR9786617 | Other | lineage4.1.1.1 | None | SRR7496509 | Other | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675275 | Other | lineage4.9 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR3675457 | Other | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4815752 | Other | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR971389 | Other | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR987722 | MDR-TB | None | SRR7496517 | Other | None | SRR3675236 | Other | None |
|---|
