lineage | Count |
---|---|
37 | |
lineage4 | 3 |
La3 | 1 |
lineage2.2.1.1 | 2 |
lineage2.2.1 | 2 |
lineage3 | 2 |
lineage4.1.2.1 | 4 |
lineage4.1.1.3 | 1 |
lineage4.3 | 1 |
lineage1.2.1.1 | 1 |
lineage2.2 | 3 |
lineage4.6.2.2 | 4 |
La2 | 1 |
lineage6.1.1 | 2 |
lineage3.1.2 | 1 |
lineage4.8;lineage4.1 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 67 |
ID | Drug resistance | Lineage | Country iso2 | SRR1172310 | HR-TB | None | SRR1169306 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1174897 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR14782405 | HR-TB | None | ERR11068534 | Sensitive | lineage4.1.2.1 | None | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR176751 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675234 | Other | None | ERR176643 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | SRR3675510 | Other | None | ERR212033 | HR-TB | None | ERR1023359 | Sensitive | lineage1.2.1.1 | None | ERR4816656 | HR-TB | None | ERR4818929 | HR-TB | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | ERR2693257 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045233 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6046397 | Other | None | SRR6046594 | HR-TB | lineage4 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4828940 | Sensitive | lineage4.1.2.1 | it | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR294266 | HR-TB | None | ERR3283032 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7131014 | Sensitive | lineage4.1.2.1 | None | ERR3283024 | Other | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR3797014 | Other | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797061 | Other | None | ERR3799304 | Other | lineage6.1.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811493 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736865 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786843 | Other | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | ERR990545 | Other | lineage3 | None |
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