Rv3854c - c.869dupA


Drug resistance types
0 Sensitive 0 RR-TB 2 HR-TB 145 MDR-TB 84 Pre-XDR-TB 9 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.1.1.3 236
lineage4.1.1.3;lineage4.8 4
spoligotype Counts
spoligotype Count
None 240
Geographic prevalence
Country level data for this variant is available for 55 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1165631 MDR-TB lineage4.1.1.3 None
ERR551246 MDR-TB lineage4.1.1.3 sz
SRR1173587 Pre-XDR-TB lineage4.1.1.3 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR11488586 Pre-XDR-TB lineage4.1.1.3 None
ERR550864 MDR-TB lineage4.1.1.3 sz
ERR553029 MDR-TB lineage4.1.1.3 None
ERR553355 MDR-TB lineage4.1.1.3 None
SRR1181086 Pre-XDR-TB lineage4.1.1.3 None
SRR1196541 Pre-XDR-TB lineage4.1.1.3 None
SRR10315667 MDR-TB lineage4.1.1.3 None
SRR1184019 Pre-XDR-TB lineage4.1.1.3 None
ERR9993128 Pre-XDR-TB lineage4.1.1.3 None
SRR1165675 MDR-TB lineage4.1.1.3 None
ERR2515479 Pre-XDR-TB lineage4.1.1.3 za
SRR1169256 MDR-TB lineage4.1.1.3 None
SRR1140965 MDR-TB lineage4.1.1.3 None
ERR553186 MDR-TB lineage4.1.1.3 sz
ERR4809073 MDR-TB lineage4.1.1.3 za
SRR1172247 MDR-TB lineage4.1.1.3 None
ERR4896315 Pre-XDR-TB lineage4.1.1.3 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR11488610 Pre-XDR-TB lineage4.1.1.3 None
ERR8975739 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403541 MDR-TB lineage4.1.1.3 za
ERR551241 MDR-TB lineage4.1.1.3 sz
SAMN02585963 Pre-XDR-TB lineage4.1.1.3 za
ERR2200064 MDR-TB lineage4.1.1.3 None
SRR6896240 Pre-XDR-TB lineage4.1.1.3 None
ERR11488754 MDR-TB lineage4.1.1.3 None
SRR1165695 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403522 MDR-TB lineage4.1.1.3 za
ERR2515597 Pre-XDR-TB lineage4.1.1.3 za
SRR1169272 MDR-TB lineage4.1.1.3 None
SRR10315722 MDR-TB lineage4.1.1.3 None
ERR550734 MDR-TB lineage4.1.1.3 sz
SRR1165274 MDR-TB lineage4.1.1.3 None
SRR1173724 MDR-TB lineage4.1.1.3;lineage4.8 None
ERR4020195 Pre-XDR-TB lineage4.1.1.3 None
ERR9992709 Pre-XDR-TB lineage4.1.1.3 None
ERR552720 MDR-TB lineage4.1.1.3 sz
ERR11488467 Pre-XDR-TB lineage4.1.1.3 None
ERR553330 MDR-TB lineage4.1.1.3 None
ERR2515346 MDR-TB lineage4.1.1.3 za
SRR9971237 Pre-XDR-TB lineage4.1.1.3 None
ERR552295 Pre-XDR-TB lineage4.1.1.3 None
ERR11488410 MDR-TB lineage4.1.1.3 None
ERR553205 MDR-TB lineage4.1.1.3 None
ERR11488540 Pre-XDR-TB lineage4.1.1.3 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR1062837 Pre-XDR-TB lineage4.1.1.3 None
SRR10315721 MDR-TB lineage4.1.1.3 None
ERR553204 MDR-TB lineage4.1.1.3 sz
ERR11488464 MDR-TB lineage4.1.1.3 None
SAMN02403533 MDR-TB lineage4.1.1.3 za
ERR552075 MDR-TB lineage4.1.1.3 None
SRR1172306 HR-TB lineage4.1.1.3 None
ERR552151 MDR-TB lineage4.1.1.3 sz
SRR833056 MDR-TB lineage4.1.1.3 None
ERR9993087 XDR-TB lineage4.1.1.3 None
ERR4020194 MDR-TB lineage4.1.1.3 None
SRR1167279 MDR-TB lineage4.1.1.3;lineage4.8 None
ERR7361983 Pre-XDR-TB lineage4.1.1.3 None
ERR7737692 MDR-TB lineage4.1.1.3 None
ERR2515425 Pre-XDR-TB lineage4.1.1.3 za
ERR9992762 XDR-TB lineage4.1.1.3 None
SRR1165669 Pre-XDR-TB lineage4.1.1.3 None
SRR1011465 Pre-XDR-TB lineage4.1.1.3 None
SRR9971050 MDR-TB lineage4.1.1.3 None
ERR11488954 XDR-TB lineage4.1.1.3 None
ERR552073 MDR-TB lineage4.1.1.3 sz
ERR7361992 Pre-XDR-TB lineage4.1.1.3 None
ERR4020192 MDR-TB lineage4.1.1.3 None
ERR553028 MDR-TB lineage4.1.1.3 sz
SAMN02053765 MDR-TB lineage4.1.1.3 za
ERR552181 MDR-TB lineage4.1.1.3 None
SRR1169289 MDR-TB lineage4.1.1.3 None
ERR11488597 Pre-XDR-TB lineage4.1.1.3 None
ERR4830549 MDR-TB lineage4.1.1.3 None
SRR1183090 Pre-XDR-TB lineage4.1.1.3 None
ERR11488904 MDR-TB lineage4.1.1.3 None
SRR9971128 MDR-TB lineage4.1.1.3 None
SRR1167338 MDR-TB lineage4.1.1.3 None
SRR1169167 MDR-TB lineage4.1.1.3 None
ERR8774397 MDR-TB lineage4.1.1.3 None
ERR552182 MDR-TB lineage4.1.1.3 None
ERR2199751 MDR-TB lineage4.1.1.3 None
ERR551938 MDR-TB lineage4.1.1.3 sz
SRR1169190 MDR-TB lineage4.1.1.3 None
SAMN02585970 Pre-XDR-TB lineage4.1.1.3 za
ERR2515386 MDR-TB lineage4.1.1.3 za
ERR552751 MDR-TB lineage4.1.1.3 sz
ERR9992638 XDR-TB lineage4.1.1.3 None
SRR1169261 MDR-TB lineage4.1.1.3 None
ERR11488649 MDR-TB lineage4.1.1.3 None
ERR9992929 XDR-TB lineage4.1.1.3 None
ERR11488733 MDR-TB lineage4.1.1.3 None
ERR4020193 MDR-TB lineage4.1.1.3 None
ERR11488437 Pre-XDR-TB lineage4.1.1.3 None
SRR9971331 MDR-TB lineage4.1.1.3 None
SRR1173213 Pre-XDR-TB lineage4.1.1.3 None
ERR2200061 MDR-TB lineage4.1.1.3 None
ERR553354 MDR-TB lineage4.1.1.3 sz
ERR11488677 Pre-XDR-TB lineage4.1.1.3 None
SRR11349141 MDR-TB lineage4.1.1.3 None
SRR1173441 Pre-XDR-TB lineage4.1.1.3 None
ERR2199805 MDR-TB lineage4.1.1.3 None
SRR1062841 Pre-XDR-TB lineage4.1.1.3 None
ERR4020191 MDR-TB lineage4.1.1.3 None
SRR1173032 Pre-XDR-TB lineage4.1.1.3 None
SRR1173861 MDR-TB lineage4.1.1.3;lineage4.8 None
SAMN02350483 Pre-XDR-TB lineage4.1.1.3 za
SRR1165336 Pre-XDR-TB lineage4.1.1.3 None
SRR1167266 MDR-TB lineage4.1.1.3 None
ERR553185 MDR-TB lineage4.1.1.3 None
ERR553105 MDR-TB lineage4.1.1.3 sz
SRR1019151 MDR-TB lineage4.1.1.3 None
SRR9971038 MDR-TB lineage4.1.1.3 None
ERR550863 MDR-TB lineage4.1.1.3 None
SRR1165209 MDR-TB lineage4.1.1.3 None
ERR7737897 MDR-TB lineage4.1.1.3 None
SRR1167368 MDR-TB lineage4.1.1.3 None
SRR1169204 MDR-TB lineage4.1.1.3 None
ERR551240 MDR-TB lineage4.1.1.3 None
SRR1169203 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403546 MDR-TB lineage4.1.1.3 za
SRR833068 MDR-TB lineage4.1.1.3 None
ERR7361958 Pre-XDR-TB lineage4.1.1.3 None
SRR1180232 Pre-XDR-TB lineage4.1.1.3 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR1173456 Pre-XDR-TB lineage4.1.1.3 None
ERR4423717 MDR-TB lineage4.1.1.3 None
SRR1172836 Pre-XDR-TB lineage4.1.1.3 None
ERR4809202 MDR-TB lineage4.1.1.3 za
ERR9993037 XDR-TB lineage4.1.1.3 None
SAMN02586027 Pre-XDR-TB lineage4.1.1.3 za
SRR11349140 MDR-TB lineage4.1.1.3 None
ERR2515990 Pre-XDR-TB lineage4.1.1.3 za
SRR9971086 MDR-TB lineage4.1.1.3 None
ERR11466358 MDR-TB lineage4.1.1.3 None
SRR1173407 MDR-TB lineage4.1.1.3 None
ERR10610374 MDR-TB lineage4.1.1.3 None
ERR552993 MDR-TB lineage4.1.1.3 None
ERR11488851 Pre-XDR-TB lineage4.1.1.3 None
SRR1140951 Pre-XDR-TB lineage4.1.1.3 None
SRR1173876 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403545 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403523 MDR-TB lineage4.1.1.3 za
SAMN02350472 MDR-TB lineage4.1.1.3 za
ERR11488409 MDR-TB lineage4.1.1.3 None
ERR552361 MDR-TB lineage4.1.1.3 sz
ERR4809065 MDR-TB lineage4.1.1.3 za
ERR551937 MDR-TB lineage4.1.1.3 None
SRR1165713 Pre-XDR-TB lineage4.1.1.3 None
ERR11488560 MDR-TB lineage4.1.1.3 None
SRR11349150 MDR-TB lineage4.1.1.3 None
ERR4809172 MDR-TB lineage4.1.1.3 za
ERR4830531 MDR-TB lineage4.1.1.3 None
SRR1173737 MDR-TB lineage4.1.1.3 None
ERR11488551 MDR-TB lineage4.1.1.3 None
ERR4020196 MDR-TB lineage4.1.1.3 None
SAMN02403532 Pre-XDR-TB lineage4.1.1.3 za
ERR11488878 Pre-XDR-TB lineage4.1.1.3 None
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR1173736 MDR-TB lineage4.1.1.3 None
SAMN02350424 Pre-XDR-TB lineage4.1.1.3 za
ERR9993054 XDR-TB lineage4.1.1.3 None
SAMN02403525 Pre-XDR-TB lineage4.1.1.3 None
ERR8976048 Pre-XDR-TB lineage4.1.1.3 None
ERR11488416 MDR-TB lineage4.1.1.3 None
ERR552074 MDR-TB lineage4.1.1.3 None
SRR1169301 Pre-XDR-TB lineage4.1.1.3 None
SRR1172330 MDR-TB lineage4.1.1.3 None
ERR550813 MDR-TB lineage4.1.1.3 sz
SRR9971378 Pre-XDR-TB lineage4.1.1.3 None
SRR1165306 Pre-XDR-TB lineage4.1.1.3 None
ERR552994 MDR-TB lineage4.1.1.3 sz
ERR4830532 MDR-TB lineage4.1.1.3 za
SRR1183001 Pre-XDR-TB lineage4.1.1.3 None
ERR553328 MDR-TB lineage4.1.1.3 None
ERR9806692 MDR-TB lineage4.1.1.3 None
ERR2515794 Pre-XDR-TB lineage4.1.1.3 za
SAMN02403577 MDR-TB lineage4.1.1.3 za
SRR1167366 MDR-TB lineage4.1.1.3 None
ERR9993121 XDR-TB lineage4.1.1.3 None
ERR2515826 Pre-XDR-TB lineage4.1.1.3 za
SRR1167260 Pre-XDR-TB lineage4.1.1.3 None
SRR1167307 MDR-TB lineage4.1.1.3 None
SRR1184339 Pre-XDR-TB lineage4.1.1.3 None
ERR551393 MDR-TB lineage4.1.1.3 sz
SAMN02403576 Pre-XDR-TB lineage4.1.1.3 None
SRR1180940 Pre-XDR-TB lineage4.1.1.3 None
ERR11488358 Pre-XDR-TB lineage4.1.1.3 None
ERR552289 MDR-TB lineage4.1.1.3 None
SAMN02350428 Pre-XDR-TB lineage4.1.1.3 za
SRR9971048 MDR-TB lineage4.1.1.3 None
ERR7737679 MDR-TB lineage4.1.1.3 None
ERR552917 MDR-TB lineage4.1.1.3 sz
SRR9971369 MDR-TB lineage4.1.1.3 None
SRR847790 Pre-XDR-TB lineage4.1.1.3 za
SRR1180152 Pre-XDR-TB lineage4.1.1.3 None
ERR11488914 Pre-XDR-TB lineage4.1.1.3 None
ERR552296 Pre-XDR-TB lineage4.1.1.3 sz
ERR2433008 Pre-XDR-TB lineage4.1.1.3 None
ERR11488784 Pre-XDR-TB lineage4.1.1.3 None
SRR924217 Pre-XDR-TB lineage4.1.1.3 None
ERR553342 MDR-TB lineage4.1.1.3 None
ERR9993044 Pre-XDR-TB lineage4.1.1.3 None
SRR1165691 MDR-TB lineage4.1.1.3 None
ERR11488460 MDR-TB lineage4.1.1.3 None
ERR552288 MDR-TB lineage4.1.1.3 sz
SRR9971181 MDR-TB lineage4.1.1.3 None
ERR9992924 Pre-XDR-TB lineage4.1.1.3 None
ERR2199778 MDR-TB lineage4.1.1.3 None
ERR550959 MDR-TB lineage4.1.1.3 sz
ERR4809200 MDR-TB lineage4.1.1.3 za
SRR1165663 MDR-TB lineage4.1.1.3 None
SRR1169189 MDR-TB lineage4.1.1.3 None
ERR552916 MDR-TB lineage4.1.1.3 None
SRR1165328 MDR-TB lineage4.1.1.3;lineage4.8 None
SAMN02585992 Pre-XDR-TB lineage4.1.1.3 za
SRR1173624 MDR-TB lineage4.1.1.3 None
ERR4020190 MDR-TB lineage4.1.1.3 None
ERR11488513 Pre-XDR-TB lineage4.1.1.3 None
ERR11488862 Pre-XDR-TB lineage4.1.1.3 None
SRR1167271 MDR-TB lineage4.1.1.3 None
ERR553264 MDR-TB lineage4.1.1.3 sz
ERR7361990 Pre-XDR-TB lineage4.1.1.3 None
SRR1181322 Pre-XDR-TB lineage4.1.1.3 None
ERR553343 MDR-TB lineage4.1.1.3 sz
ERR2199988 MDR-TB lineage4.1.1.3 None
SRR26331642 MDR-TB lineage4.1.1.3 None
SRR1165714 MDR-TB lineage4.1.1.3 None
SRR1169241 HR-TB lineage4.1.1.3 None
ERR11488546 Pre-XDR-TB lineage4.1.1.3 None
SRR1167333 MDR-TB lineage4.1.1.3 None
ERR11488499 Pre-XDR-TB lineage4.1.1.3 None
ERR11773743 XDR-TB lineage4.1.1.3 None
SAMN01925645 Pre-XDR-TB lineage4.1.1.3 None
ERR11773707 Pre-XDR-TB lineage4.1.1.3 None