Rv0006 - c.1890G>T
Drug resistance types
8 Sensitive
4 RR-TB
13 HR-TB
6 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.9 | 7 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage7 | 4 |
| lineage4.9 | 9 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.1.1.3 | 2 |
| La3;lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.2;lineage4.9 | 2 |
| lineage2.2.1 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR387051 | Other | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR9896144 | Other | lineage3 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
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