lineage | Count |
---|---|
38 | |
lineage4.9 | 9 |
lineage4.1.1.2 | 1 |
lineage4.1.2.1 | 3 |
lineage4 | 78 |
lineage4.3.2.1 | 3 |
lineage4.9;lineage2.1 | 1 |
lineage4.2.1 | 1 |
lineage1.1.2 | 1 |
lineage2.2.1 | 4 |
lineage4.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.1.2 | 2 |
La1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage1.1.3.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage2.1 | 1 |
lineage4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 150 |
ID | Drug resistance | Lineage | Country iso2 | ERR4816466 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR5341453 | Sensitive | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341467 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341469 | Other | lineage4 | None | ERR2693231 | Other | None | ERR4821655 | Sensitive | lineage4 | None | ERR2693254 | Other | None | ERR2693230 | Other | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR3283024 | Other | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR3283032 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797017 | Other | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR3797061 | Other | None | ERR4178226 | Sensitive | lineage4 | None | ERR3797044 | Other | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR6358979 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR6358991 | HR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR14801749 | Sensitive | None | ERR9634265 | Sensitive | None | SRR10808805 | Sensitive | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675246 | Sensitive | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675234 | Other | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR176751 | HR-TB | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR212001 | HR-TB | None | ERR212121 | HR-TB | None |
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