Rv2780 - c.464delG


Drug resistance types
0 Sensitive 0 RR-TB 2 HR-TB 140 MDR-TB 148 Pre-XDR-TB 27 XDR-TB 2 Other
lineage Counts
lineage Count
lineage4.1.1.3 226
lineage2.2.1 42
lineage4.2.1 8
lineage1.1.2 7
lineage2.2.1.1 1
lineage4.1.1.3;lineage4.8 3
lineage3 2
lineage4.1.1.1 1
lineage2.2.1;lineage4.3.3 4
lineage4.4.1.1.1 1
lineage4.4.1.1 1
lineage4.2.2.2 1
lineage4.7 4
lineage4.1.2.1 5
lineage2.2.2 5
lineage1.1.1 1
lineage4.1.1.3;lineage4.9 2
lineage2.2.1;lineage3.1.2 1
lineage4.5 1
lineage1.2.2.2 2
lineage1.2.2.2;lineage4.1;lineage4.3.3 1
spoligotype Counts
spoligotype Count
None 319
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4020196 MDR-TB lineage4.1.1.3 None
SRR20632776 Pre-XDR-TB lineage2.2.1 None
ERR11488677 Pre-XDR-TB lineage4.1.1.3 None
SRR1172247 MDR-TB lineage4.1.1.3 None
ERR4896315 Pre-XDR-TB lineage4.1.1.3 None
ERR1034638 Pre-XDR-TB lineage2.2.1 None
SRR9971038 MDR-TB lineage4.1.1.3 None
SRR9971181 MDR-TB lineage4.1.1.3 None
SRR1184339 Pre-XDR-TB lineage4.1.1.3 None
ERR11488464 MDR-TB lineage4.1.1.3 None
SRR1167260 Pre-XDR-TB lineage4.1.1.3 None
SRR1173032 Pre-XDR-TB lineage4.1.1.3 None
SRR1169189 MDR-TB lineage4.1.1.3 None
SRR1165336 Pre-XDR-TB lineage4.1.1.3 None
SRR1180940 Pre-XDR-TB lineage4.1.1.3 None
ERR8665662 Pre-XDR-TB lineage2.2.1 None
ERR9806692 MDR-TB lineage4.1.1.3 None
ERR10762353 Pre-XDR-TB lineage4.2.1 None
ERR4799563 Pre-XDR-TB lineage1.1.2 in
SRR1169261 MDR-TB lineage4.1.1.3 None
SRR10379978 Pre-XDR-TB lineage4.2.1 None
SRR9971237 Pre-XDR-TB lineage4.1.1.3 None
ERR13266853 Pre-XDR-TB lineage2.2.1.1 None
ERR553205 MDR-TB lineage4.1.1.3 None
ERR4020193 MDR-TB lineage4.1.1.3 None
SRR13232469 Pre-XDR-TB lineage2.2.1 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR2199805 MDR-TB lineage4.1.1.3 None
SRR847790 Pre-XDR-TB lineage4.1.1.3 za
SRR1165669 Pre-XDR-TB lineage4.1.1.3 None
ERR552151 MDR-TB lineage4.1.1.3 sz
SRR1167279 MDR-TB lineage4.1.1.3;lineage4.8 None
SRR1181322 Pre-XDR-TB lineage4.1.1.3 None
SRR10315722 MDR-TB lineage4.1.1.3 None
SRR10315721 MDR-TB lineage4.1.1.3 None
ERR552296 Pre-XDR-TB lineage4.1.1.3 sz
SRR924217 Pre-XDR-TB lineage4.1.1.3 None
ERR11773743 XDR-TB lineage4.1.1.3 None
SRR1140951 Pre-XDR-TB lineage4.1.1.3 None
ERR2516883 MDR-TB lineage3 gb
ERR7737679 MDR-TB lineage4.1.1.3 None
ERR7975649 Pre-XDR-TB lineage2.2.1 None
ERR2199778 MDR-TB lineage4.1.1.3 None
ERR552361 MDR-TB lineage4.1.1.3 sz
SRR1062837 Pre-XDR-TB lineage4.1.1.3 None
ERR4809200 MDR-TB lineage4.1.1.3 za
ERR552916 MDR-TB lineage4.1.1.3 None
ERR11488409 MDR-TB lineage4.1.1.3 None
SRR1165713 Pre-XDR-TB lineage4.1.1.3 None
SRR1183090 Pre-XDR-TB lineage4.1.1.3 None
SAMN02585992 Pre-XDR-TB lineage4.1.1.3 za
ERR4809172 MDR-TB lineage4.1.1.3 za
SRR7652976 Pre-XDR-TB lineage2.2.1 None
ERR2515479 Pre-XDR-TB lineage4.1.1.3 za
ERR551938 MDR-TB lineage4.1.1.3 sz
ERR2653235 MDR-TB lineage4.1.1.1 None
SRR9971128 MDR-TB lineage4.1.1.3 None
ERR2515386 MDR-TB lineage4.1.1.3 za
ERR553264 MDR-TB lineage4.1.1.3 sz
SRR13232759 XDR-TB lineage2.2.1;lineage4.3.3 None
SRR9971246 MDR-TB lineage4.1.1.3 None
ERR8665867 Pre-XDR-TB lineage2.2.1 None
SRR1165714 MDR-TB lineage4.1.1.3 None
SRR1169241 HR-TB lineage4.1.1.3 None
SAMN02350472 MDR-TB lineage4.1.1.3 za
SRR1167333 MDR-TB lineage4.1.1.3 None
ERR551393 MDR-TB lineage4.1.1.3 sz
ERR552181 MDR-TB lineage4.1.1.3 None
SRR25827593 XDR-TB lineage1.1.2 None
SAMN01925645 Pre-XDR-TB lineage4.1.1.3 None
ERR11773707 Pre-XDR-TB lineage4.1.1.3 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR4796435 Pre-XDR-TB lineage2.2.1 in
SRR9971050 MDR-TB lineage4.1.1.3 None
ERR553029 MDR-TB lineage4.1.1.3 None
ERR9993037 XDR-TB lineage4.1.1.3 None
SAMN02350424 Pre-XDR-TB lineage4.1.1.3 za
ERR9992838 XDR-TB lineage4.4.1.1.1 None
ERR9992929 XDR-TB lineage4.1.1.3 None
SRR13232740 XDR-TB lineage2.2.1 None
SRR9971369 MDR-TB lineage4.1.1.3 None
SRR1062841 Pre-XDR-TB lineage4.1.1.3 None
ERR9992924 Pre-XDR-TB lineage4.1.1.3 None
SRR1169204 MDR-TB lineage4.1.1.3 None
ERR2653195 Pre-XDR-TB lineage4.4.1.1 None
ERR4799930 Pre-XDR-TB lineage1.1.2 in
SAMN02403522 MDR-TB lineage4.1.1.3 za
ERR11488851 Pre-XDR-TB lineage4.1.1.3 None
ERR4423717 MDR-TB lineage4.1.1.3 None
ERR4798135 XDR-TB lineage4.2.2.2 in
SRR25827591 XDR-TB lineage1.1.2 None
SRR26331652 Pre-XDR-TB lineage2.2.1 None
ERR8976048 Pre-XDR-TB lineage4.1.1.3 None
ERR552073 MDR-TB lineage4.1.1.3 sz
SRR1169256 MDR-TB lineage4.1.1.3 None
SRR9971331 MDR-TB lineage4.1.1.3 None
ERR2510270 Pre-XDR-TB lineage3 None
ERR11488733 MDR-TB lineage4.1.1.3 None
ERR7737897 MDR-TB lineage4.1.1.3 None
ERR11488784 Pre-XDR-TB lineage4.1.1.3 None
ERR11488586 Pre-XDR-TB lineage4.1.1.3 None
SRR10315667 MDR-TB lineage4.1.1.3 None
SRR10380062 Pre-XDR-TB lineage4.2.1 None
SRR1167266 MDR-TB lineage4.1.1.3 None
SRR14801880 Pre-XDR-TB lineage2.2.1 None
ERR2199988 MDR-TB lineage4.1.1.3 None
SRR11662129 Pre-XDR-TB lineage2.2.1 None
ERR2515794 Pre-XDR-TB lineage4.1.1.3 za
ERR550864 MDR-TB lineage4.1.1.3 sz
ERR550959 MDR-TB lineage4.1.1.3 sz
SRR11349140 MDR-TB lineage4.1.1.3 None
SRR1183001 Pre-XDR-TB lineage4.1.1.3 None
ERR8665661 Pre-XDR-TB lineage2.2.1 None
SRR11349141 MDR-TB lineage4.1.1.3 None
ERR8975739 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403541 MDR-TB lineage4.1.1.3 za
ERR4020191 MDR-TB lineage4.1.1.3 None
SRR1167271 MDR-TB lineage4.1.1.3 None
ERR4829729 Pre-XDR-TB lineage4.7 it
ERR11488754 MDR-TB lineage4.1.1.3 None
ERR553185 MDR-TB lineage4.1.1.3 None
ERR4828819 Pre-XDR-TB lineage4.1.2.1 None
ERR553105 MDR-TB lineage4.1.1.3 sz
ERR550734 MDR-TB lineage4.1.1.3 sz
ERR9992762 XDR-TB lineage4.1.1.3 None
SRR1169289 MDR-TB lineage4.1.1.3 None
SRR1173724 MDR-TB lineage4.1.1.3;lineage4.8 None
ERR4020195 Pre-XDR-TB lineage4.1.1.3 None
ERR7362003 Pre-XDR-TB lineage2.2.2 None
ERR9992709 Pre-XDR-TB lineage4.1.1.3 None
ERR11488467 Pre-XDR-TB lineage4.1.1.3 None
ERR552295 Pre-XDR-TB lineage4.1.1.3 None
ERR11488610 Pre-XDR-TB lineage4.1.1.3 None
ERR8665862 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
ERR4830531 MDR-TB lineage4.1.1.3 None
ERR1035286 Pre-XDR-TB lineage4.1.2.1 br
SAMN02403533 MDR-TB lineage4.1.1.3 za
SRR833068 MDR-TB lineage4.1.1.3 None
SAMN02586027 Pre-XDR-TB lineage4.1.1.3 za
SRR10303280 Pre-XDR-TB lineage2.2.1 None
ERR9993087 XDR-TB lineage4.1.1.3 None
SAMN02585963 Pre-XDR-TB lineage4.1.1.3 za
ERR7361983 Pre-XDR-TB lineage4.1.1.3 None
ERR2515425 Pre-XDR-TB lineage4.1.1.3 za
ERR4830532 MDR-TB lineage4.1.1.3 za
SRR1011465 Pre-XDR-TB lineage4.1.1.3 None
ERR553342 MDR-TB lineage4.1.1.3 None
ERR9993044 Pre-XDR-TB lineage4.1.1.3 None
ERR3287438 Pre-XDR-TB lineage4.1.2.1 pe
ERR2515346 MDR-TB lineage4.1.1.3 za
ERR047880 MDR-TB lineage1.1.1 ru
ERR552993 MDR-TB lineage4.1.1.3 None
ERR13289281 XDR-TB lineage4.1.1.3 None
SRR1173876 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403545 Pre-XDR-TB lineage4.1.1.3 None
ERR4809065 MDR-TB lineage4.1.1.3 za
ERR8665963 Pre-XDR-TB lineage2.2.1 None
ERR4830549 MDR-TB lineage4.1.1.3 None
ERR4020190 MDR-TB lineage4.1.1.3 None
SRR1173737 MDR-TB lineage4.1.1.3 None
ERR7361992 Pre-XDR-TB lineage4.1.1.3 None
SRR1169301 Pre-XDR-TB lineage4.1.1.3 None
ERR11488862 Pre-XDR-TB lineage4.1.1.3 None
ERR11798713 Pre-XDR-TB lineage4.2.1 None
SRR9971378 Pre-XDR-TB lineage4.1.1.3 None
SRR13232480 Pre-XDR-TB lineage2.2.1 None
ERR11488546 Pre-XDR-TB lineage4.1.1.3 None
ERR11488649 MDR-TB lineage4.1.1.3 None
SRR13232708 Pre-XDR-TB lineage2.2.1 None
SAMN02403525 Pre-XDR-TB lineage4.1.1.3 None
ERR8025477 Pre-XDR-TB lineage2.2.1 None
ERR11488416 MDR-TB lineage4.1.1.3 None
SRR28351478 Pre-XDR-TB lineage2.2.1 None
SRR28351318 XDR-TB lineage4.2.1 None
SRR28646107 MDR-TB lineage4.7 None
SRR7781496 Pre-XDR-TB lineage4.1.2.1 None
ERR2515990 Pre-XDR-TB lineage4.1.1.3 za
ERR552720 MDR-TB lineage4.1.1.3 sz
ERR553204 MDR-TB lineage4.1.1.3 sz
ERR553355 MDR-TB lineage4.1.1.3 None
SRR1140965 MDR-TB lineage4.1.1.3 None
ERR9806791 Other lineage4.1.1.3;lineage4.9 None
ERR11488878 Pre-XDR-TB lineage4.1.1.3 None
ERR13262163 XDR-TB lineage2.2.1 None
ERR4799582 Pre-XDR-TB lineage2.2.1 in
ERR2199751 MDR-TB lineage4.1.1.3 None
SRR9971048 MDR-TB lineage4.1.1.3 None
ERR4809073 MDR-TB lineage4.1.1.3 za
ERR550813 MDR-TB lineage4.1.1.3 sz
SRR1173624 MDR-TB lineage4.1.1.3 None
SRR26331642 MDR-TB lineage4.1.1.3 None
SRR10303354 Pre-XDR-TB lineage2.2.1 None
ERR8665927 Pre-XDR-TB lineage2.2.1 None
ERR551246 MDR-TB lineage4.1.1.3 sz
ERR552994 MDR-TB lineage4.1.1.3 sz
ERR553354 MDR-TB lineage4.1.1.3 sz
ERR553328 MDR-TB lineage4.1.1.3 None
ERR553186 MDR-TB lineage4.1.1.3 sz
ERR550636 MDR-TB lineage4.1.1.3 None
ERR553330 MDR-TB lineage4.1.1.3 None
SAMN02403577 MDR-TB lineage4.1.1.3 za
SRR1173587 Pre-XDR-TB lineage4.1.1.3 None
ERR552288 MDR-TB lineage4.1.1.3 sz
SRR833056 MDR-TB lineage4.1.1.3 None
ERR550637 MDR-TB lineage4.1.1.3 None
SRR1173441 Pre-XDR-TB lineage4.1.1.3 None
ERR9992835 XDR-TB lineage2.2.2 None
ERR8665695 XDR-TB lineage2.2.1;lineage4.3.3 None
ERR551937 MDR-TB lineage4.1.1.3 None
SRR23311047 Pre-XDR-TB lineage4.2.1 None
SRR26331591 XDR-TB lineage2.2.1 None
SRR8358462 Pre-XDR-TB lineage2.2.1 None
SRR9971086 MDR-TB lineage4.1.1.3 None
ERR9807001 Pre-XDR-TB lineage2.2.1 None
ERR11488540 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403576 Pre-XDR-TB lineage4.1.1.3 None
SRR7898227 Pre-XDR-TB lineage1.1.2 in
SRR10430401 Pre-XDR-TB lineage2.2.1 None
SRR1173861 MDR-TB lineage4.1.1.3;lineage4.8 None
ERR1394280 Pre-XDR-TB lineage1.1.2 None
SRR6896240 Pre-XDR-TB lineage4.1.1.3 None
ERR552289 MDR-TB lineage4.1.1.3 None
ERR552075 MDR-TB lineage4.1.1.3 None
SAMN02350428 Pre-XDR-TB lineage4.1.1.3 za
ERR13243550 Pre-XDR-TB lineage2.2.2 None
ERR8665694 XDR-TB lineage2.2.1;lineage4.3.3 None
ERR2515597 Pre-XDR-TB lineage4.1.1.3 za
SRR25827304 XDR-TB lineage2.2.1;lineage3.1.2 None
SRR1180152 Pre-XDR-TB lineage4.1.1.3 None
ERR551240 MDR-TB lineage4.1.1.3 None
ERR11488954 XDR-TB lineage4.1.1.3 None
SRR1169203 Pre-XDR-TB lineage4.1.1.3 None
ERR552917 MDR-TB lineage4.1.1.3 sz
SAMN02403546 MDR-TB lineage4.1.1.3 za
ERR551241 MDR-TB lineage4.1.1.3 sz
SRR6353887 Pre-XDR-TB lineage2.2.1 None
SRR25827590 HR-TB lineage1.1.2 None
SRR1184019 Pre-XDR-TB lineage4.1.1.3 None
SRR1196541 Pre-XDR-TB lineage4.1.1.3 None
SRR1173456 Pre-XDR-TB lineage4.1.1.3 None
SRR1165274 MDR-TB lineage4.1.1.3 None
ERR11488914 Pre-XDR-TB lineage4.1.1.3 None
ERR2433008 Pre-XDR-TB lineage4.1.1.3 None
ERR4809202 MDR-TB lineage4.1.1.3 za
ERR10610061 Other lineage4.1.1.3;lineage4.9 None
SRR10040439 Pre-XDR-TB lineage4.5 None
ERR1034637 Pre-XDR-TB lineage2.2.1 None
ERR11488460 MDR-TB lineage4.1.1.3 None
ERR13258451 Pre-XDR-TB lineage2.2.1 None
ERR10610374 MDR-TB lineage4.1.1.3 None
DRR130181 Pre-XDR-TB lineage2.2.1 None
ERR552751 MDR-TB lineage4.1.1.3 sz
DRR130180 Pre-XDR-TB lineage2.2.1 None
SAMN02350483 Pre-XDR-TB lineage4.1.1.3 za
ERR4020192 MDR-TB lineage4.1.1.3 None
ERR13266987 Pre-XDR-TB lineage1.2.2.2 None
SAMN02053765 MDR-TB lineage4.1.1.3 za
ERR11488560 MDR-TB lineage4.1.1.3 None
SRR18714834 Pre-XDR-TB lineage2.2.1 None
ERR11488904 MDR-TB lineage4.1.1.3 None
SRR26331628 Pre-XDR-TB lineage2.2.1 None
SRR11349150 MDR-TB lineage4.1.1.3 None
ERR8774397 MDR-TB lineage4.1.1.3 None
ERR11488513 Pre-XDR-TB lineage4.1.1.3 None
ERR11488551 MDR-TB lineage4.1.1.3 None
ERR4828855 Pre-XDR-TB lineage4.1.2.1 None
SAMN02403532 Pre-XDR-TB lineage4.1.1.3 za
SRR3743398 Pre-XDR-TB lineage4.2.1 None
SRR1169190 MDR-TB lineage4.1.1.3 None
ERR11138659 XDR-TB lineage2.2.2 None
SAMN02585970 Pre-XDR-TB lineage4.1.1.3 za
SRR7131008 MDR-TB lineage4.7 None
SRR29055667 MDR-TB lineage4.1.1.3 None
ERR9992638 XDR-TB lineage4.1.1.3 None
ERR11488410 MDR-TB lineage4.1.1.3 None
ERR2200064 MDR-TB lineage4.1.1.3 None
SRR23310906 XDR-TB lineage2.2.1 None
ERR7361990 Pre-XDR-TB lineage4.1.1.3 None
ERR553028 MDR-TB lineage4.1.1.3 sz
SRR1173736 MDR-TB lineage4.1.1.3 None
ERR9993158 XDR-TB lineage1.2.2.2 None
SRR18715197 Pre-XDR-TB lineage2.2.1 None
ERR9993054 XDR-TB lineage4.1.1.3 None
ERR4830145 Pre-XDR-TB lineage2.2.1 None
ERR7361958 Pre-XDR-TB lineage4.1.1.3 None
ERR11488499 Pre-XDR-TB lineage4.1.1.3 None
SRR28351359 Pre-XDR-TB lineage2.2.1 None
SAMN02403523 MDR-TB lineage4.1.1.3 za
ERR13286208 Pre-XDR-TB lineage4.1.1.3 None
ERR13289015 Pre-XDR-TB lineage4.1.1.3 None
ERR13285906 Pre-XDR-TB lineage4.2.1 None
ERR11488597 Pre-XDR-TB lineage4.1.1.3 None
SRR1172836 Pre-XDR-TB lineage4.1.1.3 None
SRR1173213 Pre-XDR-TB lineage4.1.1.3 None
SRR1173407 MDR-TB lineage4.1.1.3 None
ERR11488358 Pre-XDR-TB lineage4.1.1.3 None
ERR2200061 MDR-TB lineage4.1.1.3 None
ERR4020194 MDR-TB lineage4.1.1.3 None
ERR4829049 MDR-TB lineage4.7 it
ERR7737692 MDR-TB lineage4.1.1.3 None
SRR13232781 XDR-TB lineage2.2.1 None
ERR550863 MDR-TB lineage4.1.1.3 None
ERR11466358 MDR-TB lineage4.1.1.3 None
ERR13286094 MDR-TB lineage1.2.2.2;lineage4.1;lineage4.3.3 None
ERR2515826 Pre-XDR-TB lineage4.1.1.3 za
ERR11488437 Pre-XDR-TB lineage4.1.1.3 None
ERR8025699 Pre-XDR-TB lineage2.2.1 None
ERR553343 MDR-TB lineage4.1.1.3 sz
SRR1180232 Pre-XDR-TB lineage4.1.1.3 None
SRR7657752 Pre-XDR-TB lineage2.2.1 None
ERR552074 MDR-TB lineage4.1.1.3 None
SRR1172330 MDR-TB lineage4.1.1.3 None
DRR130076 Pre-XDR-TB lineage2.2.1 None
SRR1165306 Pre-XDR-TB lineage4.1.1.3 None
ERR9993121 XDR-TB lineage4.1.1.3 None
ERR5758315 Pre-XDR-TB lineage2.2.2 None
SRR1181086 Pre-XDR-TB lineage4.1.1.3 None
ERR552182 MDR-TB lineage4.1.1.3 None
ERR9993128 Pre-XDR-TB lineage4.1.1.3 None