ERR552994
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR553328
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR553105
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR553186
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
SAMN02403541
|
MDR-TB
|
lineage4.1.1.3
|
za
|
SAMN02403576
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SAMN02585963
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SAMN02350428
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SAMN02403522
|
MDR-TB
|
lineage4.1.1.3
|
za
|
SRR7898227
|
Pre-XDR-TB
|
lineage1.1.2
|
in
|
SAMN02350483
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR552720
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR550734
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
SRR3743398
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR2229324
|
Other
|
lineage4.8
|
None
|
SAMN02403533
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR552917
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
SAMN02403546
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR2516883
|
MDR-TB
|
lineage3
|
gb
|
ERR552075
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR552151
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR552296
|
Pre-XDR-TB
|
lineage4.1.1.3
|
sz
|
ERR2433008
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SAMN02586027
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR2510270
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR2515346
|
MDR-TB
|
lineage4.1.1.3
|
za
|
SAMN02403545
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SAMN02403523
|
MDR-TB
|
lineage4.1.1.3
|
za
|
SAMN02350472
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR2515386
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR2515597
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR2515479
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR553028
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR2515425
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR552361
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR550959
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
SAMN02053765
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR2515990
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR551938
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
SAMN02585992
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR2515794
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR552182
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR2515826
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SAMN02403532
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SAMN02403542
|
MDR-TB
|
lineage4.1.1.3
|
za
|
SAMN02585970
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR553264
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR552751
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR553343
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR2515262
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SAMN02403525
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR553354
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR2653235
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR23310906
|
MDR-TB
|
lineage2.2
|
None
|
SRR23311047
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR2653195
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SAMN02403577
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR551393
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR4829049
|
MDR-TB
|
lineage4.7
|
it
|
ERR4830532
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR4830549
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4830145
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4829729
|
Pre-XDR-TB
|
lineage4.7
|
it
|
ERR551241
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR4830531
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4828819
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4828855
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR6353887
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6896240
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR552288
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR552073
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR553204
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
SRR9971237
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SAMN02350424
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SRR9971246
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR9971331
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR7131008
|
MDR-TB
|
lineage4.7
|
None
|
SRR924217
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR9971378
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR9971369
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR9971333
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR833056
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR833068
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR8358462
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971038
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR847790
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SRR9971048
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR9971050
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR7657752
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7652976
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971086
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR7781496
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR9971128
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR9971181
|
MDR-TB
|
lineage4.1.1.3
|
None
|
DRR130181
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
DRR130076
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
DRR130180
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1034638
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR047880
|
MDR-TB
|
lineage1.1.1
|
ru
|
ERR1035286
|
Pre-XDR-TB
|
lineage4.1.2.1
|
br
|
ERR1034637
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10762353
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR4020192
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4020196
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4020190
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR1394280
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
ERR3287438
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
ERR4020191
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4020193
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4423717
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4020195
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR4020194
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4796435
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799563
|
Pre-XDR-TB
|
lineage1.1.2
|
in
|
ERR4798135
|
XDR-TB
|
lineage4.2.2.2
|
in
|
ERR4809202
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR4799930
|
Pre-XDR-TB
|
lineage1.1.2
|
in
|
ERR4809073
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR4809172
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR4809200
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR4799582
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4809065
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR7361983
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR7361958
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR5863725
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7362003
|
Pre-XDR-TB
|
lineage2.2
|
None
|
ERR7361990
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR7361992
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR7737679
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR8665662
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665661
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR7737692
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR7737897
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR7975649
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665695
|
XDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
ERR8665694
|
XDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
ERR8665862
|
Pre-XDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
ERR9992762
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR8665867
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8774397
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR8665927
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665963
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8975739
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR8976048
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9992638
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9992709
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9992838
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR9993037
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9992924
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9992835
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR9992929
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993128
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993054
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993087
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993044
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993121
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR10303354
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9993158
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
SRR1011465
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1019158
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1019151
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR10303280
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10315721
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR10315667
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR10315722
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR10430401
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10379978
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR10430357
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10380062
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR11349141
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR10869076
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1062837
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1062841
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR11349140
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1140951
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR11349150
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165336
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1140965
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165306
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165328
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165209
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165274
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165673
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165631
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165663
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165669
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165683
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165675
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165691
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165695
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165713
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1167271
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1167260
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1165714
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1167266
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1167368
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1167333
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1167279
|
MDR-TB
|
lineage4.8;lineage4.1.1.3
|
None
|
SRR1167307
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR1167338
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1169190
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1167366
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1169167
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1169189
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1169203
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1169241
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1169204
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1169261
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1169272
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1169256
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1169301
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1169289
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1173441
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1172247
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1172330
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1172836
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1173032
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1173213
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1173407
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1173456
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1172306
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1173624
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1173587
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1173724
|
MDR-TB
|
lineage4.8;lineage4.1.1.3
|
None
|
SRR1173861
|
MDR-TB
|
lineage4.8;lineage4.1.1.3
|
None
|
SRR1173736
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1173737
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1181086
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1175508
|
Other
|
lineage4.9
|
None
|
SRR1180152
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1173876
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1180232
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1180940
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1183001
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1181322
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR13232480
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1183090
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1184019
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1184339
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1196541
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR13232469
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232708
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8025699
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14801880
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18714834
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20632776
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8025622
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232740
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR13232759
|
XDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
SRR13232781
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR18715197
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11138659
|
XDR-TB
|
lineage2.2.2
|
None
|
ERR8025477
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9806733
|
MDR-TB
|
lineage4
|
None
|
ERR9806692
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806778
|
MDR-TB
|
lineage4.9
|
None
|
ERR9806767
|
Pre-XDR-TB
|
|
None
|
ERR9806781
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR10610061
|
MDR-TB
|
lineage4.9
|
None
|
ERR9806791
|
MDR-TB
|
lineage4.9
|
None
|
ERR9807001
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10610193
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR8025584
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR10610096
|
MDR-TB
|
lineage4.9
|
None
|
ERR10610174
|
MDR-TB
|
lineage4
|
None
|
ERR10610374
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR10610103
|
Pre-XDR-TB
|
|
None
|
ERR551246
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR4896315
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR5758315
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR550636
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR550813
|
MDR-TB
|
lineage4.1.1.3
|
sz
|
ERR550864
|
MDR-TB
|
lineage4.1.1.3
|
sz
|