Rv3854c - c.1192_1194dupGTG


Drug resistance types
0 Sensitive 2 RR-TB 2 HR-TB 146 MDR-TB 86 Pre-XDR-TB 10 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.1.1.3 242
lineage4.1.1.3;lineage4.8 4
spoligotype Counts
spoligotype Count
None 246
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SAMN02403525 Pre-XDR-TB lineage4.1.1.3 None
ERR7361958 Pre-XDR-TB lineage4.1.1.3 None
ERR13289015 Pre-XDR-TB lineage4.1.1.3 None
ERR552720 MDR-TB lineage4.1.1.3 sz
ERR553204 MDR-TB lineage4.1.1.3 sz
ERR553355 MDR-TB lineage4.1.1.3 None
SRR9971050 MDR-TB lineage4.1.1.3 None
ERR553329 RR-TB lineage4.1.1.3 None
ERR9993037 XDR-TB lineage4.1.1.3 None
SAMN02350424 Pre-XDR-TB lineage4.1.1.3 za
ERR9992929 XDR-TB lineage4.1.1.3 None
ERR9992924 Pre-XDR-TB lineage4.1.1.3 None
ERR550863 MDR-TB lineage4.1.1.3 None
ERR2515826 Pre-XDR-TB lineage4.1.1.3 za
SRR1180232 Pre-XDR-TB lineage4.1.1.3 None
ERR2199751 MDR-TB lineage4.1.1.3 None
SRR9971331 MDR-TB lineage4.1.1.3 None
ERR4809073 MDR-TB lineage4.1.1.3 za
SRR1173624 MDR-TB lineage4.1.1.3 None
ERR7737897 MDR-TB lineage4.1.1.3 None
SRR1167266 MDR-TB lineage4.1.1.3 None
ERR552994 MDR-TB lineage4.1.1.3 sz
ERR553354 MDR-TB lineage4.1.1.3 sz
ERR9993128 Pre-XDR-TB lineage4.1.1.3 None
ERR553186 MDR-TB lineage4.1.1.3 sz
ERR550636 MDR-TB lineage4.1.1.3 None
ERR11488677 Pre-XDR-TB lineage4.1.1.3 None
SRR1167366 MDR-TB lineage4.1.1.3 None
SRR833056 MDR-TB lineage4.1.1.3 None
SRR1173441 Pre-XDR-TB lineage4.1.1.3 None
ERR8975739 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403541 MDR-TB lineage4.1.1.3 za
SRR9971181 MDR-TB lineage4.1.1.3 None
ERR11488540 Pre-XDR-TB lineage4.1.1.3 None
ERR4020191 MDR-TB lineage4.1.1.3 None
SRR1167260 Pre-XDR-TB lineage4.1.1.3 None
SRR1173032 Pre-XDR-TB lineage4.1.1.3 None
SRR1167271 MDR-TB lineage4.1.1.3 None
SRR1165336 Pre-XDR-TB lineage4.1.1.3 None
ERR552289 MDR-TB lineage4.1.1.3 None
ERR553105 MDR-TB lineage4.1.1.3 sz
ERR2515597 Pre-XDR-TB lineage4.1.1.3 za
SRR1169272 MDR-TB lineage4.1.1.3 None
SRR1169289 MDR-TB lineage4.1.1.3 None
ERR4020195 Pre-XDR-TB lineage4.1.1.3 None
SRR1167368 MDR-TB lineage4.1.1.3 None
ERR551240 MDR-TB lineage4.1.1.3 None
SRR1169203 Pre-XDR-TB lineage4.1.1.3 None
ERR553205 MDR-TB lineage4.1.1.3 None
ERR4020193 MDR-TB lineage4.1.1.3 None
SAMN02403546 MDR-TB lineage4.1.1.3 za
ERR4830531 MDR-TB lineage4.1.1.3 None
ERR2199805 MDR-TB lineage4.1.1.3 None
SRR847790 Pre-XDR-TB lineage4.1.1.3 za
SRR1165631 MDR-TB lineage4.1.1.3 None
SRR1165675 MDR-TB lineage4.1.1.3 None
SRR1184019 Pre-XDR-TB lineage4.1.1.3 None
SRR1196541 Pre-XDR-TB lineage4.1.1.3 None
ERR9993087 XDR-TB lineage4.1.1.3 None
SRR1165274 MDR-TB lineage4.1.1.3 None
ERR11488914 Pre-XDR-TB lineage4.1.1.3 None
ERR552296 Pre-XDR-TB lineage4.1.1.3 sz
ERR11773743 XDR-TB lineage4.1.1.3 None
ERR9993044 Pre-XDR-TB lineage4.1.1.3 None
SRR1140951 Pre-XDR-TB lineage4.1.1.3 None
ERR2515346 MDR-TB lineage4.1.1.3 za
ERR7737679 MDR-TB lineage4.1.1.3 None
SAMN02350483 Pre-XDR-TB lineage4.1.1.3 za
ERR2199778 MDR-TB lineage4.1.1.3 None
SRR1172306 HR-TB lineage4.1.1.3 None
ERR4020192 MDR-TB lineage4.1.1.3 None
ERR4809065 MDR-TB lineage4.1.1.3 za
SAMN02585992 Pre-XDR-TB lineage4.1.1.3 za
SRR11349150 MDR-TB lineage4.1.1.3 None
ERR4809172 MDR-TB lineage4.1.1.3 za
ERR8774397 MDR-TB lineage4.1.1.3 None
ERR11488551 MDR-TB lineage4.1.1.3 None
SAMN02403532 Pre-XDR-TB lineage4.1.1.3 za
ERR11488862 Pre-XDR-TB lineage4.1.1.3 None
SRR1169190 MDR-TB lineage4.1.1.3 None
SRR9971128 MDR-TB lineage4.1.1.3 None
SRR9971378 Pre-XDR-TB lineage4.1.1.3 None
ERR2515386 MDR-TB lineage4.1.1.3 za
ERR11488410 MDR-TB lineage4.1.1.3 None
ERR553028 MDR-TB lineage4.1.1.3 sz
SRR1173736 MDR-TB lineage4.1.1.3 None
SRR1165714 MDR-TB lineage4.1.1.3 None
SRR1169241 HR-TB lineage4.1.1.3 None
SAMN02350472 MDR-TB lineage4.1.1.3 za
ERR11488546 Pre-XDR-TB lineage4.1.1.3 None
ERR9993054 XDR-TB lineage4.1.1.3 None
ERR11488499 Pre-XDR-TB lineage4.1.1.3 None
SAMN01925645 Pre-XDR-TB lineage4.1.1.3 None
ERR2515990 Pre-XDR-TB lineage4.1.1.3 za
SRR1140965 MDR-TB lineage4.1.1.3 None
SRR1172836 Pre-XDR-TB lineage4.1.1.3 None
ERR11488358 Pre-XDR-TB lineage4.1.1.3 None
SRR1165663 MDR-TB lineage4.1.1.3 None
ERR4020194 MDR-TB lineage4.1.1.3 None
SRR1165209 MDR-TB lineage4.1.1.3 None
SRR9971369 MDR-TB lineage4.1.1.3 None
SRR1062841 Pre-XDR-TB lineage4.1.1.3 None
ERR11466358 MDR-TB lineage4.1.1.3 None
SAMN02403522 MDR-TB lineage4.1.1.3 za
ERR4423717 MDR-TB lineage4.1.1.3 None
ERR8976048 Pre-XDR-TB lineage4.1.1.3 None
ERR552073 MDR-TB lineage4.1.1.3 sz
ERR553343 MDR-TB lineage4.1.1.3 sz
SRR1169256 MDR-TB lineage4.1.1.3 None
ERR552074 MDR-TB lineage4.1.1.3 None
SRR9971048 MDR-TB lineage4.1.1.3 None
ERR550813 MDR-TB lineage4.1.1.3 sz
SRR1165306 Pre-XDR-TB lineage4.1.1.3 None
SRR26331642 MDR-TB lineage4.1.1.3 None
SRR1181086 Pre-XDR-TB lineage4.1.1.3 None
ERR551246 MDR-TB lineage4.1.1.3 sz
ERR4020196 MDR-TB lineage4.1.1.3 None
ERR550864 MDR-TB lineage4.1.1.3 sz
ERR550959 MDR-TB lineage4.1.1.3 sz
ERR552288 MDR-TB lineage4.1.1.3 sz
SRR11349140 MDR-TB lineage4.1.1.3 None
SRR1183001 Pre-XDR-TB lineage4.1.1.3 None
SRR1172247 MDR-TB lineage4.1.1.3 None
ERR4896315 Pre-XDR-TB lineage4.1.1.3 None
SRR11349141 MDR-TB lineage4.1.1.3 None
SRR9971038 MDR-TB lineage4.1.1.3 None
SRR1167307 MDR-TB lineage4.1.1.3 None
SRR9971086 MDR-TB lineage4.1.1.3 None
ERR11488464 MDR-TB lineage4.1.1.3 None
SAMN02403576 Pre-XDR-TB lineage4.1.1.3 None
SRR1167338 MDR-TB lineage4.1.1.3 None
SRR1169189 MDR-TB lineage4.1.1.3 None
SRR1180940 Pre-XDR-TB lineage4.1.1.3 None
ERR553185 MDR-TB lineage4.1.1.3 None
ERR9806692 MDR-TB lineage4.1.1.3 None
ERR550734 MDR-TB lineage4.1.1.3 sz
ERR9992762 XDR-TB lineage4.1.1.3 None
SRR1173724 MDR-TB lineage4.1.1.3;lineage4.8 None
SRR1169261 MDR-TB lineage4.1.1.3 None
SRR9971237 Pre-XDR-TB lineage4.1.1.3 None
ERR552295 Pre-XDR-TB lineage4.1.1.3 None
ERR551241 MDR-TB lineage4.1.1.3 sz
SAMN02403533 MDR-TB lineage4.1.1.3 za
SRR833068 MDR-TB lineage4.1.1.3 None
ERR552151 MDR-TB lineage4.1.1.3 sz
SRR1167279 MDR-TB lineage4.1.1.3;lineage4.8 None
SRR1181322 Pre-XDR-TB lineage4.1.1.3 None
SRR1173456 Pre-XDR-TB lineage4.1.1.3 None
ERR2433008 Pre-XDR-TB lineage4.1.1.3 None
ERR4809202 MDR-TB lineage4.1.1.3 za
ERR7361983 Pre-XDR-TB lineage4.1.1.3 None
ERR2515425 Pre-XDR-TB lineage4.1.1.3 za
SRR924217 Pre-XDR-TB lineage4.1.1.3 None
ERR4830532 MDR-TB lineage4.1.1.3 za
SRR1011465 Pre-XDR-TB lineage4.1.1.3 None
ERR553342 MDR-TB lineage4.1.1.3 None
ERR11488460 MDR-TB lineage4.1.1.3 None
ERR10610374 MDR-TB lineage4.1.1.3 None
SRR1173876 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403545 Pre-XDR-TB lineage4.1.1.3 None
ERR552361 MDR-TB lineage4.1.1.3 sz
SRR1062837 Pre-XDR-TB lineage4.1.1.3 None
ERR4809200 MDR-TB lineage4.1.1.3 za
SAMN02053765 MDR-TB lineage4.1.1.3 za
ERR552916 MDR-TB lineage4.1.1.3 None
ERR11488409 MDR-TB lineage4.1.1.3 None
SRR1165713 Pre-XDR-TB lineage4.1.1.3 None
SRR1183090 Pre-XDR-TB lineage4.1.1.3 None
ERR11488904 MDR-TB lineage4.1.1.3 None
SRR1169167 MDR-TB lineage4.1.1.3 None
ERR7361992 Pre-XDR-TB lineage4.1.1.3 None
SRR1169301 Pre-XDR-TB lineage4.1.1.3 None
ERR551938 MDR-TB lineage4.1.1.3 sz
SAMN02585970 Pre-XDR-TB lineage4.1.1.3 za
ERR11488649 MDR-TB lineage4.1.1.3 None
SRR1167333 MDR-TB lineage4.1.1.3 None
ERR551393 MDR-TB lineage4.1.1.3 sz
ERR552181 MDR-TB lineage4.1.1.3 None
ERR11488416 MDR-TB lineage4.1.1.3 None
ERR11773707 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403523 MDR-TB lineage4.1.1.3 za
ERR13286208 Pre-XDR-TB lineage4.1.1.3 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR11488597 Pre-XDR-TB lineage4.1.1.3 None
SRR1173213 Pre-XDR-TB lineage4.1.1.3 None
SRR1173407 MDR-TB lineage4.1.1.3 None
ERR553029 MDR-TB lineage4.1.1.3 None
ERR2200061 MDR-TB lineage4.1.1.3 None
ERR7737692 MDR-TB lineage4.1.1.3 None
SRR1169204 MDR-TB lineage4.1.1.3 None
ERR11488878 Pre-XDR-TB lineage4.1.1.3 None
ERR11488851 Pre-XDR-TB lineage4.1.1.3 None
ERR11488437 Pre-XDR-TB lineage4.1.1.3 None
SRR1172330 MDR-TB lineage4.1.1.3 None
SRR1165328 MDR-TB lineage4.1.1.3;lineage4.8 None
ERR11488733 MDR-TB lineage4.1.1.3 None
ERR11488784 Pre-XDR-TB lineage4.1.1.3 None
ERR11488586 Pre-XDR-TB lineage4.1.1.3 None
ERR9993121 XDR-TB lineage4.1.1.3 None
SRR10315667 MDR-TB lineage4.1.1.3 None
ERR552182 MDR-TB lineage4.1.1.3 None
ERR2199988 MDR-TB lineage4.1.1.3 None
ERR553328 MDR-TB lineage4.1.1.3 None
ERR553330 MDR-TB lineage4.1.1.3 None
ERR2515794 Pre-XDR-TB lineage4.1.1.3 za
SAMN02403577 MDR-TB lineage4.1.1.3 za
SRR1173587 Pre-XDR-TB lineage4.1.1.3 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR551937 MDR-TB lineage4.1.1.3 None
SRR1184339 Pre-XDR-TB lineage4.1.1.3 None
SRR1173861 MDR-TB lineage4.1.1.3;lineage4.8 None
SRR6896240 Pre-XDR-TB lineage4.1.1.3 None
ERR552075 MDR-TB lineage4.1.1.3 None
ERR11488754 MDR-TB lineage4.1.1.3 None
SAMN02350428 Pre-XDR-TB lineage4.1.1.3 za
SRR1165695 Pre-XDR-TB lineage4.1.1.3 None
SRR1019151 MDR-TB lineage4.1.1.3 None
SRR1165691 MDR-TB lineage4.1.1.3 None
SRR1180152 Pre-XDR-TB lineage4.1.1.3 None
ERR9992709 Pre-XDR-TB lineage4.1.1.3 None
ERR11488467 Pre-XDR-TB lineage4.1.1.3 None
ERR11488954 XDR-TB lineage4.1.1.3 None
ERR11488610 Pre-XDR-TB lineage4.1.1.3 None
ERR552917 MDR-TB lineage4.1.1.3 sz
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SAMN02586027 Pre-XDR-TB lineage4.1.1.3 za
SRR1165669 Pre-XDR-TB lineage4.1.1.3 None
SAMN02585963 Pre-XDR-TB lineage4.1.1.3 za
SRR10315722 MDR-TB lineage4.1.1.3 None
SRR10315721 MDR-TB lineage4.1.1.3 None
ERR552751 MDR-TB lineage4.1.1.3 sz
ERR552993 MDR-TB lineage4.1.1.3 None
ERR13289281 XDR-TB lineage4.1.1.3 None
ERR2200060 RR-TB lineage4.1.1.3 None
ERR11488560 MDR-TB lineage4.1.1.3 None
ERR4830549 MDR-TB lineage4.1.1.3 None
ERR4020190 MDR-TB lineage4.1.1.3 None
SRR1173737 MDR-TB lineage4.1.1.3 None
ERR11488513 Pre-XDR-TB lineage4.1.1.3 None
ERR2515479 Pre-XDR-TB lineage4.1.1.3 za
ERR553264 MDR-TB lineage4.1.1.3 sz
SRR29055667 MDR-TB lineage4.1.1.3 None
SRR9971246 MDR-TB lineage4.1.1.3 None
ERR9992638 XDR-TB lineage4.1.1.3 None
ERR2200064 MDR-TB lineage4.1.1.3 None
ERR7361990 Pre-XDR-TB lineage4.1.1.3 None