Rv3601c - c.108C>G
Drug resistance types
0 Sensitive
0 RR-TB
63 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2 | 2 |
| lineage4.5 | 1 |
| 71 | |
| lineage4.9;La3 | 1 |
| lineage4.1.1 | 2 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1 | 4 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.8;La3 | 1 |
| lineage2.2 | 7 |
| La1.8.1 | 1 |
| lineage4 | 3 |
| lineage4.6.2.2 | 2 |
| lineage4.9 | 2 |
| La1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3 | 1 |
| La3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20969677 | HR-TB | lineage2 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR2101617 | Other | lineage4.1.1 | None | ERR4815604 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176751 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR176793 | Other | lineage4.1.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675465 | HR-TB | None | SRR3675488 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675311 | Other | None | SRR3675236 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675221 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | SRR3675501 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR212033 | HR-TB | None | SRR3675572 | Other | None | ERR212121 | HR-TB | None | SRR5341333 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | SRR5341302 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | ERR4830353 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046540 | HR-TB | None | SRR6046644 | HR-TB | None | ERR323043 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502532 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR1035157 | Other | lineage4.9 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3797036 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR3797069 | Other | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4407463 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR5336148 | Other | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR736835 | HR-TB | None | ERR702404 | HR-TB | None | ERR6358991 | HR-TB | None | ERR702406 | HR-TB | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | SRR1169194 | Other | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119669 | HR-TB | None | SRR1167384 | Other | lineage4 | None | ERR736874 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR1196546 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR1172728 | MDR-TB | None | SRR1173778 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184294 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1169306 | Other | None | SRR1172817 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR12142341 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR15368973 | Other | None | SRR12416824 | HR-TB | None |
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