EBG00000313325 - n.878G>A


Drug resistance types
0 Sensitive 3 RR-TB 4 HR-TB 156 MDR-TB 88 Pre-XDR-TB 4 XDR-TB 10 Other
lineage Counts
lineage Count
lineage4.1.1.3 187
lineage4.4 1
lineage1.1.2 10
lineage1.2.1.2 2
lineage4.9 5
lineage1.2.1.2.1 5
lineage4.8 11
lineage3.1 7
lineage4.1.2.1 6
lineage4.3.4.2.1 1
lineage1.1.1.1 4
lineage3 4
La1.8.1 1
lineage4.6.2.2 2
5
lineage4.9;lineage3 1
lineage4.4.1.1.1 4
lineage4.8;lineage4.1.1.3 3
lineage4.1.1 3
lineage4.5 1
lineage4.1.3 1
lineage1.2.2.1 1
spoligotype Counts
spoligotype Count
None 265
Geographic prevalence
Country level data for this variant is available for 77 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SAMN02403532 Pre-XDR-TB lineage4.1.1.3 za
ERR551938 MDR-TB lineage4.1.1.3 sz
ERR552751 MDR-TB lineage4.1.1.3 sz
ERR553264 MDR-TB lineage4.1.1.3 sz
ERR2515990 Pre-XDR-TB lineage4.1.1.3 za
SAMN02585970 Pre-XDR-TB lineage4.1.1.3 za
SRR5341306 Pre-XDR-TB lineage4.4 None
ERR553343 MDR-TB lineage4.1.1.3 sz
SAMN02403542 MDR-TB lineage4.1.1.3 za
SRR5341359 Pre-XDR-TB lineage1.1.2 in
ERR2515262 Pre-XDR-TB lineage4.1.1.3 None
SRR5817479 MDR-TB lineage1.2.1.2 au
SAMN02403525 Pre-XDR-TB lineage4.1.1.3 None
ERR2653163 HR-TB lineage4.9 None
ERR4822342 MDR-TB lineage1.2.1.2.1 None
SAMN02403577 MDR-TB lineage4.1.1.3 za
ERR553354 MDR-TB lineage4.1.1.3 sz
ERR4830532 MDR-TB lineage4.1.1.3 za
ERR551241 MDR-TB lineage4.1.1.3 sz
ERR4830531 MDR-TB lineage4.1.1.3 None
ERR4830549 MDR-TB lineage4.1.1.3 None
ERR4829005 Pre-XDR-TB lineage4.8 None
SRR6896240 Pre-XDR-TB lineage4.1.1.3 None
SAMN02414990 MDR-TB lineage3.1 se
SRR6152927 Other lineage1.2.1.2 ca
ERR552288 MDR-TB lineage4.1.1.3 sz
ERR551393 MDR-TB lineage4.1.1.3 sz
ERR552073 MDR-TB lineage4.1.1.3 sz
SRR7496513 MDR-TB lineage1.2.1.2.1 us
ERR553204 MDR-TB lineage4.1.1.3 sz
SAMN02350424 Pre-XDR-TB lineage4.1.1.3 za
SRR9971237 Pre-XDR-TB lineage4.1.1.3 None
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR924217 Pre-XDR-TB lineage4.1.1.3 None
ERR3132148 MDR-TB lineage4.1.2.1 None
SRR9971331 MDR-TB lineage4.1.1.3 None
SRR833068 MDR-TB lineage4.1.1.3 None
SRR9738484 MDR-TB lineage4.8 None
SRR833056 MDR-TB lineage4.1.1.3 None
SRR9971038 MDR-TB lineage4.1.1.3 None
SRR9971369 MDR-TB lineage4.1.1.3 None
SRR9971378 Pre-XDR-TB lineage4.1.1.3 None
SRR847790 Pre-XDR-TB lineage4.1.1.3 za
SRR7592325 MDR-TB lineage4.8 None
SRR7592347 Pre-XDR-TB lineage4.8 None
SRR9971048 MDR-TB lineage4.1.1.3 None
SRR9971086 MDR-TB lineage4.1.1.3 None
SRR9971050 MDR-TB lineage4.1.1.3 None
SRR9971181 MDR-TB lineage4.1.1.3 None
SRR9971128 MDR-TB lineage4.1.1.3 None
DRR130131 MDR-TB lineage1.2.1.2.1 None
ERR1023386 Other lineage4.3.4.2.1 None
ERR3287571 MDR-TB lineage4.1.2.1 None
ERR1035108 Other lineage1.1.1.1 vn
ERR11044001 MDR-TB lineage1.1.2 None
ERR10680219 RR-TB lineage4.1.2.1 None
ERR11043545 MDR-TB lineage3.1 None
ERR4020192 MDR-TB lineage4.1.1.3 None
ERR3335743 Pre-XDR-TB lineage3 pk
ERR3335769 Pre-XDR-TB lineage3 pk
ERR4020191 MDR-TB lineage4.1.1.3 None
ERR3335739 Pre-XDR-TB lineage3 pk
ERR3439548 Other La1.8.1 None
ERR4020193 MDR-TB lineage4.1.1.3 None
ERR4020196 MDR-TB lineage4.1.1.3 None
ERR4423717 MDR-TB lineage4.1.1.3 None
ERR4020190 MDR-TB lineage4.1.1.3 None
ERR4020195 Pre-XDR-TB lineage4.1.1.3 None
ERR4020194 MDR-TB lineage4.1.1.3 None
ERR4423759 MDR-TB lineage4.6.2.2 None
ERR4796913 Pre-XDR-TB lineage4.1.1.3 in
ERR4553594 MDR-TB None
ERR4553617 MDR-TB None
ERR4809172 MDR-TB lineage4.1.1.3 za
ERR4809065 MDR-TB lineage4.1.1.3 za
ERR4809073 MDR-TB lineage4.1.1.3 za
ERR4809200 MDR-TB lineage4.1.1.3 za
ERR5865067 MDR-TB lineage4.8 None
ERR4809202 MDR-TB lineage4.1.1.3 za
ERR5865068 MDR-TB lineage4.8 None
ERR5897084 Pre-XDR-TB lineage4.9;lineage3 None
ERR5865066 MDR-TB lineage4.8 None
ERR5865065 MDR-TB lineage4.8 None
ERR7361983 Pre-XDR-TB lineage4.1.1.3 None
ERR7361958 Pre-XDR-TB lineage4.1.1.3 None
ERR7361992 Pre-XDR-TB lineage4.1.1.3 None
ERR7361990 Pre-XDR-TB lineage4.1.1.3 None
ERR7737692 MDR-TB lineage4.1.1.3 None
ERR7737679 MDR-TB lineage4.1.1.3 None
ERR8975739 Pre-XDR-TB lineage4.1.1.3 None
ERR775335 MDR-TB lineage4.1.2.1 pe
ERR7737897 MDR-TB lineage4.1.1.3 None
ERR8774397 MDR-TB lineage4.1.1.3 None
ERR8774480 MDR-TB lineage4.6.2.2 None
ERR8976048 Pre-XDR-TB lineage4.1.1.3 None
ERR9125624 Other lineage1.1.2 None
ERR9030460 MDR-TB lineage1.1.2 None
ERR9125418 MDR-TB lineage1.2.1.2.1 None
ERR9992709 Pre-XDR-TB lineage4.1.1.3 None
ERR983237 MDR-TB lineage1.1.2 None
ERR9992638 Pre-XDR-TB lineage4.1.1.3 None
ERR9992924 Pre-XDR-TB lineage4.1.1.3 None
ERR9992762 XDR-TB lineage4.1.1.3 None
ERR9993054 XDR-TB lineage4.1.1.3 None
ERR9993037 Pre-XDR-TB lineage4.1.1.3 None
ERR9992929 XDR-TB lineage4.1.1.3 None
ERR9993044 Pre-XDR-TB lineage4.1.1.3 None
ERR9993087 XDR-TB lineage4.1.1.3 None
ERR9993128 Pre-XDR-TB lineage4.1.1.3 None
ERR9993121 Pre-XDR-TB lineage4.1.1.3 None
SRR1019158 Pre-XDR-TB lineage4.1.1.3 None
SRR1011465 Pre-XDR-TB lineage4.1.1.3 None
SRR1011469 Other lineage4.9 None
SRR1019151 MDR-TB lineage4.1.1.3 None
SRR1140965 MDR-TB lineage4.1.1.3 None
SRR10315721 MDR-TB lineage4.1.1.3 None
SRR10525358 MDR-TB lineage4.8 None
SRR10869076 Pre-XDR-TB lineage4.1.1.3 None
SRR11349140 MDR-TB lineage4.1.1.3 None
SRR11349141 MDR-TB lineage4.1.1.3 None
SRR1140951 Pre-XDR-TB lineage4.1.1.3 None
SRR10315667 MDR-TB lineage4.1.1.3 None
SRR10315722 MDR-TB lineage4.1.1.3 None
SRR1062837 Pre-XDR-TB lineage4.1.1.3 None
SRR1062841 Pre-XDR-TB lineage4.1.1.3 None
SRR11349150 MDR-TB lineage4.1.1.3 None
SRR1165274 MDR-TB lineage4.1.1.3 None
SRR1162758 MDR-TB lineage3.1 None
SRR1165209 MDR-TB lineage4.1.1.3 None
SRR1165328 MDR-TB lineage4.1.1.3 None
SRR1165290 MDR-TB lineage4.4.1.1.1 None
SRR1165306 Pre-XDR-TB lineage4.1.1.3 None
SRR1165675 MDR-TB lineage4.1.1.3 None
SRR1165673 MDR-TB lineage4.1.1.3 None
SRR1165373 MDR-TB lineage3.1 None
SRR1165336 Pre-XDR-TB lineage4.1.1.3 None
SRR1165631 MDR-TB lineage4.1.1.3 None
SRR1165663 MDR-TB lineage4.1.1.3 None
SRR1165683 Pre-XDR-TB lineage4.1.1.3 None
SRR1165691 MDR-TB lineage4.1.1.3 None
SRR1165669 Pre-XDR-TB lineage4.1.1.3 None
SRR1165695 Pre-XDR-TB lineage4.1.1.3 None
SRR1167260 Pre-XDR-TB lineage4.1.1.3 None
SRR1165714 MDR-TB lineage4.1.1.3 None
SRR1166817 MDR-TB lineage3.1 None
SRR1167069 MDR-TB lineage3.1 None
SRR1165713 Pre-XDR-TB lineage4.1.1.3 None
SRR1167254 MDR-TB lineage4.4.1.1.1 None
SRR1167271 MDR-TB lineage4.1.1.3 None
SRR1167266 MDR-TB lineage4.1.1.3 None
SRR1167338 MDR-TB lineage4.1.1.3 None
SRR1167279 MDR-TB lineage4.8;lineage4.1.1.3 None
SRR1167307 MDR-TB lineage4.1.1 None
SRR1167333 MDR-TB lineage4.1.1.3 None
SRR1167368 MDR-TB lineage4.1.1.3 None
SRR1169167 Pre-XDR-TB lineage4.1.1.3 None
SRR1167366 MDR-TB lineage4.1.1.3 None
SRR1169204 MDR-TB lineage4.1.1.3 None
SRR1169190 MDR-TB lineage4.1.1.3 None
SRR1169189 MDR-TB lineage4.1.1.3 None
SRR1169256 MDR-TB lineage4.1.1.3 None
SRR1169203 Pre-XDR-TB lineage4.1.1.3 None
SRR1169241 MDR-TB lineage4.1.1.3 None
SRR1169261 MDR-TB lineage4.1.1.3 None
SRR1169301 Pre-XDR-TB lineage4.1.1.3 None
SRR1169289 MDR-TB lineage4.1.1.3 None
SRR1169272 MDR-TB lineage4.1.1.3 None
SRR1173032 Pre-XDR-TB lineage4.1.1.3 None
SRR1172247 MDR-TB lineage4.1.1.3 None
SRR1172330 MDR-TB lineage4.1.1.3 None
SRR1172836 Pre-XDR-TB lineage4.1.1.3 None
SRR1172848 MDR-TB lineage1.1.2 None
SRR1172873 MDR-TB lineage1.1.2 None
SRR1172306 Pre-XDR-TB lineage4.1.1.3 None
SRR1173407 MDR-TB lineage4.1.1.3 None
SRR1173213 Pre-XDR-TB lineage4.1.1.3 None
SRR1173282 MDR-TB lineage4.4.1.1.1 None
SRR1173441 Pre-XDR-TB lineage4.1.1.3 None
SRR1173554 Pre-XDR-TB lineage4.1.1.3 None
SRR1173456 Pre-XDR-TB lineage4.1.1.3 None
SRR1173724 MDR-TB lineage4.8;lineage4.1.1.3 None
SRR1173624 MDR-TB lineage4.1.1.3 None
SRR1173587 Pre-XDR-TB lineage4.1.1.3 None
SRR1173736 MDR-TB lineage4.1.1.3 None
SRR1173737 MDR-TB lineage4.1.1.3 None
SRR1181086 Pre-XDR-TB lineage4.1.1.3 None
SRR1180232 Pre-XDR-TB lineage4.1.1.3 None
SRR1180940 Pre-XDR-TB lineage4.1.1.3 None
SRR1173861 MDR-TB lineage4.8;lineage4.1.1.3 None
SRR1173876 Pre-XDR-TB lineage4.1.1.3 None
SRR1180152 Pre-XDR-TB lineage4.1.1.3 None
SRR1183090 Pre-XDR-TB lineage4.1.1.3 None
SRR1181322 Pre-XDR-TB lineage4.1.1.3 None
SRR1183001 Pre-XDR-TB lineage4.1.1.3 None
ERR11081912 MDR-TB lineage3.1 None
SRR1196541 Pre-XDR-TB lineage4.1.1.3 None
SRR16058316 MDR-TB lineage1.2.1.2.1 None
SRR1184019 Pre-XDR-TB lineage4.1.1.3 None
SRR1184339 Pre-XDR-TB lineage4.1.1.3 None
SRR15014652 MDR-TB lineage4.9 None
SRR15316455 HR-TB lineage4.5 None
SRR16058448 Other lineage1.1.2 None
SRR22424941 Pre-XDR-TB lineage1.1.2 None
ERR9806778 MDR-TB lineage4.9 None
ERR11082668 Pre-XDR-TB lineage4.1.3 None
ERR9806692 MDR-TB lineage4.1.1.3 None
ERR9806781 MDR-TB lineage4.1.1 None
ERR10610096 MDR-TB lineage4.9 None
ERR10610193 MDR-TB lineage4.1.1 None
ERR551246 MDR-TB lineage4.1.1.3 sz
ERR4896315 Pre-XDR-TB lineage4.1.1.3 None
ERR10610374 MDR-TB lineage4.1.1.3 None
ERR550864 MDR-TB lineage4.1.1.3 sz
ERR1465791 HR-TB lineage4.1.2.1 ch
ERR550813 MDR-TB lineage4.1.1.3 sz
ERR550636 MDR-TB lineage4.1.1.3 None
SAMN02403520 MDR-TB lineage4.4.1.1.1 za
SAMN02403576 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403541 MDR-TB lineage4.1.1.3 za
ERR552994 MDR-TB lineage4.1.1.3 sz
ERR553328 MDR-TB lineage4.1.1.3 None
ERR553186 MDR-TB lineage4.1.1.3 sz
SAMN02350428 Pre-XDR-TB lineage4.1.1.3 za
SAMN02585963 Pre-XDR-TB lineage4.1.1.3 za
SAMN02350483 Pre-XDR-TB lineage4.1.1.3 za
SRR5485595 RR-TB None
ERR553105 MDR-TB lineage4.1.1.3 sz
ERR212108 RR-TB lineage1.2.2.1 mw
SAMN02403522 MDR-TB lineage4.1.1.3 za
ERR550734 MDR-TB lineage4.1.1.3 sz
ERR2510135 MDR-TB lineage4.1.2.1 pe
SRR5485447 MDR-TB None
SAMN02403546 MDR-TB lineage4.1.1.3 za
ERR2510568 Pre-XDR-TB lineage3 pk
ERR552075 MDR-TB lineage4.1.1.3 None
ERR2510705 Pre-XDR-TB lineage4.8 it
ERR552296 Pre-XDR-TB lineage4.1.1.3 sz
SRR5073912 Other lineage1.1.1.1 vn
ERR2433008 Pre-XDR-TB lineage4.1.1.3 None
SAMN02586027 Pre-XDR-TB lineage4.1.1.3 za
ERR552720 MDR-TB lineage4.1.1.3 sz
ERR552917 MDR-TB lineage4.1.1.3 sz
SAMN02403533 MDR-TB lineage4.1.1.3 za
ERR552151 MDR-TB lineage4.1.1.3 sz
SRR5485475 Other None
SAMN02599179 MDR-TB lineage1.1.2 None
SRR5074117 Other lineage1.1.1.1 vn
SAMN02403545 Pre-XDR-TB lineage4.1.1.3 None
ERR2515346 MDR-TB lineage4.1.1.3 za
SRR5065236 HR-TB lineage1.1.1.1 vn
SAMN02403523 MDR-TB lineage4.1.1.3 za
ERR552361 MDR-TB lineage4.1.1.3 sz
SAMN02350472 MDR-TB lineage4.1.1.3 za
ERR2515425 Pre-XDR-TB lineage4.1.1.3 za
ERR2515386 MDR-TB lineage4.1.1.3 za
SAMN02053765 MDR-TB lineage4.1.1.3 za
ERR550959 MDR-TB lineage4.1.1.3 sz
ERR2515479 Pre-XDR-TB lineage4.1.1.3 za
ERR553028 MDR-TB lineage4.1.1.3 sz
ERR2516583 MDR-TB lineage4.8 nl
ERR2515597 Pre-XDR-TB lineage4.1.1.3 za
SAMN02585992 Pre-XDR-TB lineage4.1.1.3 za
ERR2515794 Pre-XDR-TB lineage4.1.1.3 za
ERR552182 MDR-TB lineage4.1.1.3 None
ERR2515826 Pre-XDR-TB lineage4.1.1.3 za