Rv3795 - c.1713G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
14 Sensitive
4 RR-TB
20 HR-TB
7 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 4 |
| lineage4.9 | 23 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.1.1.3 | 2 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.1 | 1 |
| lineage3 | 3 |
| La3;lineage4.9 | 4 |
| lineage2.2.1.1 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.2;lineage4.9 | 3 |
| 2 | |
| lineage4.9;lineage7 | 4 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.9.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| M.canetti;lineage4.9 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4 | 1 |
| M.canetti;lineage2.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 78 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180137 | Other | lineage2.2.1 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675284 | Sensitive | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR9786526 | Other | lineage4.1 | None | ERR990545 | Other | lineage3 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR9786843 | Other | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR29055611 | Sensitive | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR1169249 | Other | lineage4.9 | None | SRR29097004 | Other | lineage3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR29097058 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR245758 | Other | lineage4.9.1 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR9896144 | Other | lineage3 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR212033 | Other | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR9786525 | Other | lineage4 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR6045555 | Other | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None |
|---|
