Rv0565c - c.1080C>G


Drug resistance types
0 Sensitive 2 RR-TB 32 HR-TB 17 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 53 Other
lineage Counts
lineage Count
10
lineage3.1.2.1;lineage4 1
lineage4.9 11
lineage4.9;lineage6.3 5
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 8
lineage2.1;lineage4.9 9
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.1.3 2
lineage4.6.2.2 2
M.canetti;lineage4.2;lineage4.9 1
lineage4.1.1.1 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.1.2.1 2
La3;lineage2 1
M.canetti;lineage2.1;lineage6.3 2
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
La1.7;M.canetti;lineage4.9 1
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
lineage2.2.1 4
M.canetti;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9;lineage7 1
lineage4.8.1 1
lineage4.2;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.1.1.3 1
La1.2.BCG 1
lineage3 1
lineage2.1 2
lineage2.2.1;lineage3 1
lineage4 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 106
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9117709 Other None
SRR6789626 Other None
SRR28351455 Other lineage3.1.2.1;lineage4 None
SRR18213713 HR-TB None
ERR4407463 HR-TB None
SRR28119777 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR26399973 Other La3;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR234659 HR-TB None
SRR25827682 Other None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18003019 Other lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675572 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR9786843 Other None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4798262 HR-TB La1.2.BCG None
ERR4800341 HR-TB lineage3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR2027263 Other lineage4 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3797070 Other lineage4.9 None
ERR176751 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None