Rv3794 - c.-16C>G
Drug resistance types
0 Sensitive
3 RR-TB
3 HR-TB
128 MDR-TB
84 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 70 |
| lineage4.3.4.1 | 1 |
| lineage3 | 8 |
| lineage2.2.1 | 41 |
| lineage4.1.2.1 | 42 |
| lineage2.2.2 | 15 |
| lineage2.2.1.1 | 5 |
| lineage4.3.4.2 | 15 |
| lineage4.2.2 | 3 |
| lineage2.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.4.2 | 2 |
| lineage4.2.2.1 | 1 |
| lineage4.8 | 3 |
| lineage2.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 218 |
Geographic prevalence
Country level data for this variant is available for 171 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02403532 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR3287746 | HR-TB | lineage4.3.4.1 | pe | SAMN02585970 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4797755 | MDR-TB | lineage3 | in | ERR2516188 | MDR-TB | lineage2.2.1 | be | ERR2515739 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR553264 | MDR-TB | lineage4.1.1.3 | sz | ERR552751 | MDR-TB | lineage4.1.1.3 | sz | ERR2510294 | Pre-XDR-TB | lineage3 | pk | ERR2515386 | MDR-TB | lineage4.1.1.3 | za | ERR4810965 | MDR-TB | lineage2.2.2 | cn | ERR4797061 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2515262 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1723539 | MDR-TB | lineage2.2.1 | None | ERR8975791 | Pre-XDR-TB | lineage2.2.2 | None | ERR553343 | MDR-TB | lineage4.1.1.3 | sz | SAMN02053753 | MDR-TB | lineage4.1.2.1 | za | ERR8975780 | Pre-XDR-TB | lineage2.2.2 | None | ERR751427 | MDR-TB | lineage4.3.4.2 | pe | SRR6397784 | MDR-TB | lineage2.2.1 | ca | SAMN02350424 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2516924 | MDR-TB | lineage4.2.2 | gb | ERR4811352 | MDR-TB | lineage2.2.1 | cn | SAMN02403542 | MDR-TB | lineage4.1.1.3 | za | ERR7361983 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4829735 | MDR-TB | lineage4.1.2.1 | it | ERR10796641 | MDR-TB | lineage2.2 | None | SAMN02403525 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4798726 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR8976048 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4808898 | MDR-TB | lineage2.2.2 | None | SRR23310935 | MDR-TB | lineage4.2.1 | None | ERR7911176 | MDR-TB | lineage2.2.1 | vn | ERR551246 | MDR-TB | lineage4.1.1.3 | sz | ERR550813 | MDR-TB | lineage4.1.1.3 | sz | ERR553053 | MDR-TB | lineage4.1.2.1 | sz | SRR7517822 | Pre-XDR-TB | lineage2.2.1 | ch | ERR2864235 | MDR-TB | lineage2.2.1 | pt | SRR2101574 | Pre-XDR-TB | lineage4.1.2.1 | None | SAMN02053805 | MDR-TB | lineage4.3.3 | za | ERR1873505 | MDR-TB | lineage2.2.2 | za | ERR4831801 | MDR-TB | lineage2.2.1 | vn | SAMEA2533962 | MDR-TB | lineage2.2.1 | uz | SRR4034388 | MDR-TB | lineage4.1.2.1 | za | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR550864 | MDR-TB | lineage4.1.1.3 | sz | SRR671725 | MDR-TB | lineage4.4.2 | cn | ERR4831259 | MDR-TB | lineage4.2.2.1 | de | ERR4799730 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2515542 | MDR-TB | lineage4.1.2.1 | za | ERR2516023 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR4831908 | MDR-TB | lineage2.2.1 | vn | ERR751437 | MDR-TB | lineage4.3.3 | pe | ERR2864252 | MDR-TB | lineage2.2.1 | pt | ERR2515588 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR553216 | MDR-TB | lineage4.1.2.1 | sz | ERR552994 | MDR-TB | lineage4.1.1.3 | sz | ERR4811666 | MDR-TB | lineage4.3.4.2 | pe | ERR2515479 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4830057 | MDR-TB | lineage2.2.1 | None | ERR4830532 | MDR-TB | lineage4.1.1.3 | za | ERR4831245 | Pre-XDR-TB | lineage2.2.1 | None | ERR553328 | MDR-TB | lineage4.1.1.3 | None | ERR2516017 | MDR-TB | lineage4.1.2.1 | za | ERR553354 | MDR-TB | lineage4.1.1.3 | sz | ERR5918126 | MDR-TB | lineage2.2.2 | za | ERR751574 | MDR-TB | lineage4.3.4.2 | pe | SRR671861 | MDR-TB | lineage4.4.2 | cn | ERR553186 | MDR-TB | lineage4.1.1.3 | sz | ERR4830117 | MDR-TB | lineage2.2.1 | None | SRR6397708 | MDR-TB | lineage2.2.1 | ca | SRR6397730 | MDR-TB | lineage2.2.1 | ca | SAMN02403577 | MDR-TB | lineage4.1.1.3 | za | ERR2515794 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2515826 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4809073 | MDR-TB | lineage4.1.1.3 | za | ERR2516878 | MDR-TB | lineage3 | gb | SRR6256986 | MDR-TB | lineage2.2.1 | ru | ERR4812958 | MDR-TB | lineage4.3.3 | pe | ERR4813367 | Pre-XDR-TB | lineage4.1.2.1 | None | SAMEA2533860 | HR-TB | lineage2.2.1 | None | SRR671842 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4808893 | Pre-XDR-TB | lineage2.2.2 | za | SRR6824645 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4830134 | MDR-TB | lineage2.2.1 | None | ERR8975739 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR671797 | Pre-XDR-TB | lineage2.2.2 | cn | ERR551241 | MDR-TB | lineage4.1.1.3 | sz | SAMN02403541 | MDR-TB | lineage4.1.1.3 | za | ERR551393 | MDR-TB | lineage4.1.1.3 | sz | ERR4808875 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02350428 | Pre-XDR-TB | lineage4.1.1.3 | za | SAMN02403576 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2516045 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR1036286 | MDR-TB | lineage2.2.1 | pt | ERR2515982 | MDR-TB | lineage4.1.2.1 | za | SAMN02350483 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1034724 | MDR-TB | lineage4.1.2.1 | pe | SAMN02585963 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR5073654 | MDR-TB | lineage2.2.1 | vn | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | SAMN02053783 | MDR-TB | lineage4.1.2.1 | za | SRR4034389 | MDR-TB | lineage4.1.2.1 | za | SRR4034387 | MDR-TB | lineage4.1.2.1 | za | SAMN02403522 | MDR-TB | lineage4.1.1.3 | za | ERR751597 | MDR-TB | lineage4.3.4.2 | pe | ERR550734 | MDR-TB | lineage4.1.1.3 | sz | ERR4830099 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824451 | MDR-TB | lineage2.2.1 | cn | ERR2515597 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR553105 | MDR-TB | lineage4.1.1.3 | sz | ERR4810958 | MDR-TB | lineage4.2.2 | cn | ERR4811292 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3287599 | HR-TB | lineage4.1.2.1 | pe | ERR8975755 | Pre-XDR-TB | lineage2.2.2 | None | ERR1034826 | MDR-TB | lineage2.2.1 | pt | ERR3287372 | MDR-TB | lineage4.1.2.1 | pe | ERR4797047 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2515199 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515346 | MDR-TB | lineage4.1.1.3 | za | ERR4830043 | MDR-TB | lineage2.2.1 | None | ERR2864296 | MDR-TB | lineage2.2.1 | pt | ERR1034613 | Pre-XDR-TB | lineage3 | pk | ERR2516439 | RR-TB | lineage4.8 | nl | SRR6397471 | Pre-XDR-TB | lineage2.2.1 | ca | ERR2516091 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR552720 | MDR-TB | lineage4.1.1.3 | sz | ERR7911309 | MDR-TB | lineage2.2.1 | vn | ERR2515583 | MDR-TB | lineage4.1.2.1 | za | SAMN02403546 | MDR-TB | lineage4.1.1.3 | za | SAMN02585961 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR4799853 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR552917 | MDR-TB | lineage4.1.1.3 | sz | ERR4810928 | Pre-XDR-TB | lineage2.2.1 | cn | ERR8976092 | Pre-XDR-TB | lineage2.2.2 | None | ERR400517 | Pre-XDR-TB | lineage2.2.1 | gb | SRR8651652 | MDR-TB | lineage2.1 | cn | ERR553204 | MDR-TB | lineage4.1.1.3 | sz | ERR4828973 | MDR-TB | lineage4.4.1.1 | None | SAMN02403533 | MDR-TB | lineage4.1.1.3 | za | ERR4830114 | Pre-XDR-TB | lineage2.2.1 | tj | ERR4796484 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR847790 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1036294 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR552075 | MDR-TB | lineage4.1.1.3 | None | ERR4808905 | Pre-XDR-TB | lineage2.2.2 | za | ERR552151 | MDR-TB | lineage4.1.1.3 | sz | ERR1034852 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR2101482 | MDR-TB | lineage4.1.2.1 | None | ERR751559 | MDR-TB | lineage4.3.4.2 | pe | ERR8665610 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287454 | MDR-TB | lineage4.3.4.2 | pe | ERR4808894 | Pre-XDR-TB | lineage2.2.2 | za | ERR751496 | MDR-TB | lineage4.3.4.2 | pe | ERR4831458 | MDR-TB | lineage3 | None | ERR552296 | Pre-XDR-TB | lineage4.1.1.3 | sz | ERR4809252 | MDR-TB | lineage4.1.2.1 | za | ERR2433008 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4809202 | MDR-TB | lineage4.1.1.3 | za | SAMN03246476 | Pre-XDR-TB | lineage2.2.1 | cn | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | ERR2515425 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4831429 | Pre-XDR-TB | lineage3 | None | ERR2516653 | RR-TB | lineage4.8 | nl | ERR4799644 | Pre-XDR-TB | lineage3 | in | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | ERR8975846 | Pre-XDR-TB | lineage2.2.2 | None | ERR4796733 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR4822321 | Pre-XDR-TB | lineage2.2.1 | de | ERR4813057 | MDR-TB | lineage4.3.4.2 | None | SAMN02586027 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2515255 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | za | ERR2515361 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515135 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR5918116 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR8975696 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2515990 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR3287541 | MDR-TB | lineage4.1.2.1 | None | ERR2515667 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR8976096 | MDR-TB | lineage4.1.2.1 | None | SAMN02585972 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR552288 | MDR-TB | lineage4.1.1.3 | sz | ERR3287752 | MDR-TB | lineage4.3.4.2 | pe | ERR552073 | MDR-TB | lineage4.1.1.3 | sz | SAMN02350472 | MDR-TB | lineage4.1.1.3 | za | SAMN02403545 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2516874 | MDR-TB | lineage3 | gb | ERR2515264 | Pre-XDR-TB | lineage4.1.2.1 | za | SAMN02403523 | MDR-TB | lineage4.1.1.3 | za | ERR1036296 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR3287840 | MDR-TB | lineage4.3.4.2 | pe | ERR2516722 | RR-TB | lineage4.8 | nl | ERR550959 | MDR-TB | lineage4.1.1.3 | sz | ERR552361 | MDR-TB | lineage4.1.1.3 | sz | ERR7911372 | MDR-TB | lineage4.3.4.2 | pe | ERR4809200 | MDR-TB | lineage4.1.1.3 | za | ERR553028 | MDR-TB | lineage4.1.1.3 | sz | SRR5709819 | MDR-TB | lineage1.1.1 | th | SRR4034386 | MDR-TB | lineage4.1.2.1 | za | ERR8975976 | Pre-XDR-TB | lineage2.2.2 | None | ERR3287465 | MDR-TB | lineage4.3.4.2 | pe | SAMN02419604 | Pre-XDR-TB | lineage2.2.1 | by | ERR1034857 | MDR-TB | lineage2.2.1 | pt | ERR4831443 | Pre-XDR-TB | lineage3.1.2 | pk | ERR4809065 | MDR-TB | lineage4.1.1.3 | za | SAMN02053765 | MDR-TB | lineage4.1.1.3 | za | ERR8975760 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR117460 | MDR-TB | lineage2.2.1 | ru | ERR4828845 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR552182 | MDR-TB | lineage4.1.1.3 | None | SAMN02585992 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR4034390 | MDR-TB | lineage4.1.2.1 | za | ERR4809172 | MDR-TB | lineage4.1.1.3 | za | ERR4830531 | MDR-TB | lineage4.1.1.3 | None | ERR2516884 | MDR-TB | lineage4.2.2 | gb | ERR4830123 | MDR-TB | lineage2.2.1 | None | ERR7911682 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR551938 | MDR-TB | lineage4.1.1.3 | sz |
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