Rv3794 - c.-16C>G


Drug resistance types
0 Sensitive 12 RR-TB 11 HR-TB 355 MDR-TB 238 Pre-XDR-TB 47 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.1.2.1 113
lineage4.1.1.3 235
lineage2.2.1 124
lineage4.4.2 3
lineage2.2.2 59
lineage4.3.3 8
lineage4.8 7
lineage3 15
lineage4.2.1 6
lineage4.3.4.1 7
lineage2.2.1.1 7
lineage4.1.1.3;lineage4.8 4
lineage6.2.2 1
lineage4.1.3 6
lineage4.2.2 4
lineage4.4.1.1 4
lineage1.2.2.2 4
lineage4.3.4.2 32
lineage2.2.1;lineage4.1.4 1
lineage4.3.2 1
lineage1.1.1 2
lineage4.3.2;lineage4.3.3 1
lineage3.1.1 1
lineage4.2.2.1 2
lineage4.6.2.2 5
lineage3.1 1
lineage1.1.2 1
lineage4 1
lineage2.1 2
lineage2.1;lineage2.2.1 1
lineage5.3 1
lineage4.3.2.1 1
lineage1.1.3.2 1
lineage5.1.4 1
lineage3.1.2 1
spoligotype Counts
spoligotype Count
None 663
Geographic prevalence
Country level data for this variant is available for 169 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR4034388 MDR-TB lineage4.1.2.1 za
ERR550636 MDR-TB lineage4.1.1.3 None
ERR5864652 MDR-TB lineage2.2.1 None
ERR4827461 MDR-TB lineage2.2.1 None
SRR9971378 Pre-XDR-TB lineage4.1.1.3 None
SRR1165306 Pre-XDR-TB lineage4.1.1.3 None
SRR671725 MDR-TB lineage4.4.2 cn
ERR550864 MDR-TB lineage4.1.1.3 sz
ERR9786068 MDR-TB lineage2.2.1 None
ERR9992948 XDR-TB lineage2.2.2 None
ERR751437 MDR-TB lineage4.3.3 pe
ERR553355 MDR-TB lineage4.1.1.3 None
ERR2515542 MDR-TB lineage4.1.2.1 za
ERR2864252 MDR-TB lineage2.2.1 pt
ERR9992702 XDR-TB lineage4.1.2.1 None
SRR1181086 Pre-XDR-TB lineage4.1.1.3 None
ERR553216 MDR-TB lineage4.1.2.1 sz
SRR833131 MDR-TB lineage4.1.2.1 None
SRR26937005 MDR-TB lineage4.8 None
ERR4831245 Pre-XDR-TB lineage2.2.1 None
ERR9993128 Pre-XDR-TB lineage4.1.1.3 None
SRR1180181 Pre-XDR-TB lineage4.1.2.1 None
SRR1165675 MDR-TB lineage4.1.1.3 None
ERR9992693 Pre-XDR-TB lineage4.1.2.1 None
ERR9992756 XDR-TB lineage2.2.2 None
SRR1140965 MDR-TB lineage4.1.1.3 None
ERR5918126 MDR-TB lineage2.2.2 za
ERR4828007 MDR-TB lineage2.2.1 None
ERR8025504 Pre-XDR-TB lineage2.2.2 None
SRR6397730 MDR-TB lineage2.2.1 ca
ERR2516878 MDR-TB lineage3 gb
SRR1180276 Pre-XDR-TB lineage4.1.2.1 None
SRR25207247 MDR-TB lineage2.2.2 None
ERR4812958 MDR-TB lineage4.3.3 pe
ERR11488610 Pre-XDR-TB lineage4.1.1.3 None
SRR6256986 MDR-TB lineage2.2.1 ru
ERR4827992 MDR-TB lineage2.2.1 None
SRR5486876 MDR-TB lineage4.2.1 None
ERR4830134 MDR-TB lineage2.2.1 None
SRR6824645 Pre-XDR-TB lineage2.2.1 cn
ERR2199805 MDR-TB lineage4.1.1.3 None
ERR2200060 RR-TB lineage4.1.1.3 None
SAMN02403541 MDR-TB lineage4.1.1.3 za
SRR24710200 MDR-TB lineage2.2.1 None
ERR551327 HR-TB lineage2.2.1 None
SRR10040310 Pre-XDR-TB lineage2.2.1 None
ERR2516045 Pre-XDR-TB lineage4.1.2.1 za
DRR130090 Pre-XDR-TB lineage4.3.4.1 None
ERR9806812 MDR-TB lineage4.1.2.1 None
ERR983238 MDR-TB lineage2.2.1.1 None
SRR1173861 MDR-TB lineage4.1.1.3;lineage4.8 None
ERR2200064 MDR-TB lineage4.1.1.3 None
SRR6896240 Pre-XDR-TB lineage4.1.1.3 None
ERR11488754 MDR-TB lineage4.1.1.3 None
SRR4034387 MDR-TB lineage4.1.2.1 za
SAMN02350428 Pre-XDR-TB lineage4.1.1.3 za
ERR10680206 RR-TB lineage6.2.2 None
SRR998798 MDR-TB lineage4.1.3 None
ERR553105 MDR-TB lineage4.1.1.3 sz
SRR1019151 MDR-TB lineage4.1.1.3 None
ERR10748523 RR-TB lineage2.2.1 None
ERR550863 MDR-TB lineage4.1.1.3 None
SRR1165209 MDR-TB lineage4.1.1.3 None
ERR4810958 MDR-TB lineage4.2.2 cn
ERR4828135 Pre-XDR-TB lineage2.2.1 None
ERR1034826 MDR-TB lineage2.2.1 pt
ERR9992678 XDR-TB lineage4.1.2.1 None
SRR1173724 MDR-TB lineage4.1.1.3;lineage4.8 None
ERR8975755 Pre-XDR-TB lineage2.2.2 None
ERR4811292 Pre-XDR-TB lineage2.2.1 cn
ERR3287372 MDR-TB lineage4.1.2.1 pe
ERR7737897 MDR-TB lineage4.1.1.3 None
ERR4797047 Pre-XDR-TB lineage2.2.1.1 in
SRR25389424 Pre-XDR-TB lineage2.2.1 None
ERR9993148 Pre-XDR-TB lineage4.1.2.1 None
ERR10610161 Pre-XDR-TB lineage4.1.2.1 None
ERR9992709 Pre-XDR-TB lineage4.1.1.3 None
ERR9786072 MDR-TB lineage2.2.1 None
ERR11488467 Pre-XDR-TB lineage4.1.1.3 None
ERR2515346 MDR-TB lineage4.1.1.3 za
ERR7911309 MDR-TB lineage2.2.1 vn
SAMN02585961 Pre-XDR-TB lineage4.1.2.1 za
SRR22424753 MDR-TB lineage3 None
ERR11488410 MDR-TB lineage4.1.1.3 None
ERR688045 Pre-XDR-TB lineage3 None
ERR3287803 MDR-TB lineage4.3.3 None
SAMN02403546 MDR-TB lineage4.1.1.3 za
ERR10610330 Pre-XDR-TB lineage2.2.2 None
SRR10040180 MDR-TB lineage2.2.2 None
ERR4831595 Pre-XDR-TB lineage4.1.2.1 None
SRR9971367 Pre-XDR-TB lineage4.1.2.1 None
SRR1062837 Pre-XDR-TB lineage4.1.1.3 None
ERR400517 Pre-XDR-TB lineage2.2.1 gb
ERR4828973 MDR-TB lineage4.4.1.1 None
SAMN02403533 MDR-TB lineage4.1.1.3 za
SRR833068 MDR-TB lineage4.1.1.3 None
ERR1034629 MDR-TB lineage2.2.1 None
ERR4796484 Pre-XDR-TB lineage1.2.2.2 in
ERR4830114 Pre-XDR-TB lineage2.2.1 tj
ERR9993017 XDR-TB lineage4.1.2.1 None
ERR12311980 MDR-TB lineage2.2.1 None
SRR9971236 Pre-XDR-TB lineage4.1.2.1 None
ERR1036294 Pre-XDR-TB lineage4.3.4.2 pt
ERR8665610 Pre-XDR-TB lineage2.2.1 None
SRR998797 MDR-TB lineage4.1.3 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR9786828 MDR-TB lineage2.2.1;lineage4.1.4 None
SRR1180152 Pre-XDR-TB lineage4.1.1.3 None
ERR11488914 Pre-XDR-TB lineage4.1.1.3 None
ERR9992977 XDR-TB lineage2.2.2 None
SRR1167279 MDR-TB lineage4.1.1.3;lineage4.8 None
ERR4831458 MDR-TB lineage3 None
SRR4034391 MDR-TB lineage4.1.2.1 None
SRR21732819 Pre-XDR-TB lineage2.2.1 None
ERR7361983 Pre-XDR-TB lineage4.1.1.3 None
SRR10040384 MDR-TB lineage2.2.2 None
ERR9992701 XDR-TB lineage4.1.2.1 None
SRR924217 Pre-XDR-TB lineage4.1.1.3 None
ERR11488651 MDR-TB lineage4.1.2.1 None
SRR22757408 Pre-XDR-TB lineage2.2.1 None
ERR9992762 XDR-TB lineage4.1.1.3 None
ERR9992722 XDR-TB lineage2.2.2 None
ERR8025355 Pre-XDR-TB lineage4.1.2.1 None
SRR1011465 Pre-XDR-TB lineage4.1.1.3 None
SRR22424802 HR-TB lineage3 None
ERR4796733 Pre-XDR-TB lineage4.1.1.3 in
SRR833075 MDR-TB lineage4.1.2.1 None
ERR553342 MDR-TB lineage4.1.1.3 None
ERR10610164 MDR-TB lineage4.1.2.1 None
SRR1181171 Pre-XDR-TB lineage4.1.2.1 None
ERR776661 MDR-TB lineage4.3.2 None
SRR9971071 Pre-XDR-TB lineage4.1.2.1 None
SRR11349140 MDR-TB lineage4.1.1.3 None
ERR2515361 Pre-XDR-TB lineage4.1.2.1 za
ERR3273216 RR-TB lineage1.1.1 None
ERR5987408 Pre-XDR-TB lineage4.1.2.1 None
SRR25827610 Pre-XDR-TB lineage4.1.1.3 None
ERR6865796 MDR-TB lineage4.3.4.2 None
ERR5918116 XDR-TB lineage4.1.2.1 za
SAMEA5569996 MDR-TB lineage4.3.2;lineage4.3.3 None
SRR17163495 MDR-TB lineage3.1.1 None
ERR11488762 MDR-TB lineage4.1.2.1 None
SRR10854751 MDR-TB lineage4.3.4.2 None
ERR9992907 XDR-TB lineage4.1.2.1 None
ERR3287541 MDR-TB lineage4.1.2.1 None
SRR9971181 MDR-TB lineage4.1.1.3 None
ERR552993 MDR-TB lineage4.1.1.3 None
ERR552073 MDR-TB lineage4.1.1.3 sz
ERR7361992 Pre-XDR-TB lineage4.1.1.3 None
SRR1162971 Pre-XDR-TB lineage2.2.1 None
ERR11082668 Pre-XDR-TB lineage4.1.3 None
ERR4831259 MDR-TB lineage4.2.2.1 de
SRR6511598 MDR-TB lineage2.2.1 None
ERR553029 MDR-TB lineage4.1.1.3 None
ERR4831908 MDR-TB lineage2.2.1 vn
SRR1196541 Pre-XDR-TB lineage4.1.1.3 None
SRR1184019 Pre-XDR-TB lineage4.1.1.3 None
ERR4830045 Pre-XDR-TB lineage2.2.1 None
ERR551328 HR-TB lineage2.2.1 None
ERR552994 MDR-TB lineage4.1.1.3 sz
ERR9993049 Pre-XDR-TB lineage4.1.2.1 None
ERR4811666 MDR-TB lineage4.3.4.2 pe
SRR1183001 Pre-XDR-TB lineage4.1.1.3 None
SRR1173213 Pre-XDR-TB lineage4.1.1.3 None
SRR12420293 HR-TB lineage2.2.1 None
ERR751574 MDR-TB lineage4.3.4.2 pe
ERR553354 MDR-TB lineage4.1.1.3 sz
SRR671861 MDR-TB lineage4.4.2 cn
ERR553186 MDR-TB lineage4.1.1.3 sz
ERR4830117 MDR-TB lineage2.2.1 None
ERR2516017 MDR-TB lineage4.1.2.1 za
SRR6397708 MDR-TB lineage2.2.1 ca
SRR10315617 Pre-XDR-TB lineage4.1.2.1 None
SRR9738497 MDR-TB lineage4.8 None
ERR9992848 XDR-TB lineage2.2.2 None
SRR11349141 MDR-TB lineage4.1.1.3 None
SRR8327859 MDR-TB lineage2.2.1 None
SRR1173441 Pre-XDR-TB lineage4.1.1.3 None
ERR11083084 MDR-TB lineage4.3.3 None
ERR4872253 MDR-TB lineage4.6.2.2 None
SRR1167260 Pre-XDR-TB lineage4.1.1.3 None
SAMEA2533860 HR-TB lineage2.2.1 None
ERR4813367 Pre-XDR-TB lineage4.1.2.1 None
ERR4808893 Pre-XDR-TB lineage2.2.2 za
SRR671842 Pre-XDR-TB lineage2.2.1 cn
SRR10315618 Pre-XDR-TB lineage4.1.2.1 None
ERR8975739 Pre-XDR-TB lineage4.1.1.3 None
SRR1184339 Pre-XDR-TB lineage4.1.1.3 None
ERR11488638 MDR-TB lineage4.4.1.1 None
ERR4808875 Pre-XDR-TB lineage2.2.2 za
ERR551241 MDR-TB lineage4.1.1.3 sz
ERR9119882 MDR-TB lineage2.2.2 None
SRR5073654 MDR-TB lineage2.2.1 vn
ERR4020191 MDR-TB lineage4.1.1.3 None
SRR1173032 Pre-XDR-TB lineage4.1.1.3 None
SRR1180940 Pre-XDR-TB lineage4.1.1.3 None
ERR11488358 Pre-XDR-TB lineage4.1.1.3 None
ERR1036286 MDR-TB lineage2.2.1 pt
ERR2515982 MDR-TB lineage4.1.2.1 za
ERR8025671 Pre-XDR-TB lineage2.2.2 None
SRR12142417 Pre-XDR-TB lineage2.2.1 None
SRR1165336 Pre-XDR-TB lineage4.1.1.3 None
ERR552289 MDR-TB lineage4.1.1.3 None
SRR4034389 MDR-TB lineage4.1.2.1 za
ERR9992692 Pre-XDR-TB lineage4.1.2.1 None
SRR1165695 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403522 MDR-TB lineage4.1.1.3 za
SRR24799245 Pre-XDR-TB lineage4.3.4.2 None
ERR4830099 Pre-XDR-TB lineage2.2.1 None
ERR9993194 MDR-TB lineage2.2.2 None
ERR9992793 XDR-TB lineage2.2.2 None
SRR6824451 MDR-TB lineage2.2.1 cn
ERR2515597 Pre-XDR-TB lineage4.1.1.3 za
SRR10040284 Pre-XDR-TB lineage2.2.1 None
ERR11049638 HR-TB lineage3 None
SRR1169272 MDR-TB lineage4.1.1.3 None
SRR25389429 Pre-XDR-TB lineage2.2.1 None
SRR10315722 MDR-TB lineage4.1.1.3 None
ERR9993196 XDR-TB lineage2.2.2 None
ERR7737679 MDR-TB lineage4.1.1.3 None
SRR1165274 MDR-TB lineage4.1.1.3 None
ERR3287599 HR-TB lineage4.1.2.1 pe
ERR9029849 MDR-TB lineage4.3.3 None
SRR1180419 Pre-XDR-TB lineage4.1.2.1 None
ERR4830043 MDR-TB lineage2.2.1 None
ERR11083048 MDR-TB lineage4.6.2.2 None
ERR5979441 MDR-TB lineage3.1 None
ERR2516091 Pre-XDR-TB lineage4.1.2.1 za
ERR4276906 Pre-XDR-TB lineage2.2.1 None
ERR552720 MDR-TB lineage4.1.1.3 sz
ERR2864296 MDR-TB lineage2.2.1 pt
SRR23310935 MDR-TB lineage4.2.1 None
ERR7737652 MDR-TB lineage4.1.2.1 None
ERR2516439 RR-TB lineage4.8 nl
ERR552295 Pre-XDR-TB lineage4.1.1.3 None
SRR6964565 MDR-TB lineage1.1.2 None
ERR552917 MDR-TB lineage4.1.1.3 sz
SRR9971369 MDR-TB lineage4.1.1.3 None
ERR4810928 Pre-XDR-TB lineage2.2.1 cn
ERR4024744 MDR-TB lineage4.3.4.2 None
ERR11488540 Pre-XDR-TB lineage4.1.1.3 None
ERR10112852 Pre-XDR-TB lineage2.2.2 None
ERR2515583 MDR-TB lineage4.1.2.1 za
SRR25207034 Pre-XDR-TB lineage2.2.1 None
SRR10315721 MDR-TB lineage4.1.1.3 None
SRR21031680 MDR-TB lineage2.2.2 None
ERR10112864 MDR-TB lineage2.2.2 None
ERR9993112 Pre-XDR-TB lineage2.2.2 None
ERR3132093 MDR-TB lineage4 None
ERR4808905 XDR-TB lineage2.2.2 za
DRR130089 Pre-XDR-TB lineage4.3.4.1 None
ERR1034852 Pre-XDR-TB lineage4.3.4.2 pt
DRR130187 Pre-XDR-TB lineage4.3.4.1 None
ERR751559 MDR-TB lineage4.3.4.2 pe
ERR9993087 XDR-TB lineage4.1.1.3 None
SRR18054784 MDR-TB lineage2.2.2 None
SRR1180232 Pre-XDR-TB lineage4.1.1.3 None
ERR3287454 MDR-TB lineage4.3.4.2 pe
ERR4808894 Pre-XDR-TB lineage2.2.2 za
SRR1173456 Pre-XDR-TB lineage4.1.1.3 None
ERR751496 MDR-TB lineage4.3.4.2 pe
ERR4020194 MDR-TB lineage4.1.1.3 None
ERR4827708 HR-TB lineage2.2.1 None
SRR20969642 MDR-TB lineage2.2.1 None
ERR4809252 MDR-TB lineage4.1.2.1 za
ERR4423717 MDR-TB lineage4.1.1.3 None
SRR1172836 Pre-XDR-TB lineage4.1.1.3 None
ERR2433008 Pre-XDR-TB lineage4.1.1.3 None
ERR4809202 MDR-TB lineage4.1.1.3 za
ERR11082811 HR-TB lineage2.2.1 None
ERR4352120 MDR-TB lineage2.2.1 None
SRR3085270 MDR-TB lineage2.2.1 None
ERR7737692 MDR-TB lineage4.1.1.3 None
ERR2516653 RR-TB lineage4.8 nl
ERR2515425 Pre-XDR-TB lineage4.1.1.3 za
ERR4831429 Pre-XDR-TB lineage3 None
SRR6896523 Pre-XDR-TB lineage4.1.2.1 None
ERR4799644 XDR-TB lineage3 in
ERR8025710 Pre-XDR-TB lineage2.2.2 None
SRR1165669 Pre-XDR-TB lineage4.1.1.3 None
ERR9992670 XDR-TB lineage4.1.2.1 None
ERR10748141 XDR-TB lineage2.2.2 None
SRR12420305 RR-TB lineage2.2.1 None
SRR9971050 MDR-TB lineage4.1.1.3 None
ERR4831837 MDR-TB lineage2.2.1 None
ERR9993044 Pre-XDR-TB lineage4.1.1.3 None
ERR4822321 Pre-XDR-TB lineage2.2.1 de
ERR9992892 XDR-TB lineage2.2.2 None
ERR12057433 MDR-TB lineage2.2.1 None
ERR8975656 XDR-TB lineage2.2.2 None
ERR4813718 MDR-TB lineage4.3.4.2 None
ERR2515135 Pre-XDR-TB lineage4.1.2.1 za
SRR1165691 MDR-TB lineage4.1.1.3 None
ERR8975696 XDR-TB lineage4.1.2.1 None
ERR9806949 Pre-XDR-TB lineage4.1.2.1 None
ERR1063895 MDR-TB lineage4.1.2.1 None
ERR2515990 Pre-XDR-TB lineage4.1.1.3 za
SRR6982216 Pre-XDR-TB lineage4.1.2.1 None
SRR9971086 MDR-TB lineage4.1.1.3 None
ERR11488460 MDR-TB lineage4.1.1.3 None
ERR8976096 MDR-TB lineage4.1.2.1 None
ERR552288 MDR-TB lineage4.1.1.3 sz
ERR11488851 Pre-XDR-TB lineage4.1.1.3 None
SRR1140951 Pre-XDR-TB lineage4.1.1.3 None
ERR3287752 MDR-TB lineage4.3.4.2 pe
SRR10869259 Pre-XDR-TB lineage2.2.2 None
SRR18714978 MDR-TB lineage4.6.2.2 None
SRR1173876 Pre-XDR-TB lineage4.1.1.3 None
SRR25206894 Pre-XDR-TB lineage2.2.1 None
SRR25389423 Pre-XDR-TB lineage2.2.1 None
ERR550959 MDR-TB lineage4.1.1.3 sz
ERR11488567 MDR-TB lineage4.1.2.1 None
ERR551937 MDR-TB lineage4.1.1.3 None
ERR552916 MDR-TB lineage4.1.1.3 None
SAMN02419604 Pre-XDR-TB lineage2.2.1 by
ERR1034857 MDR-TB lineage2.2.1 pt
SRR1181279 Pre-XDR-TB lineage4.1.2.1 None
ERR11082853 MDR-TB lineage4.2.2.1 None
ERR8975976 XDR-TB lineage2.2.2 None
ERR8975760 XDR-TB lineage4.1.2.1 None
ERR4828845 Pre-XDR-TB lineage4.4.1.1 None
SRR1169289 MDR-TB lineage4.1.1.3 None
SRR832995 MDR-TB lineage4.3.3 None
ERR11488597 Pre-XDR-TB lineage4.1.1.3 None
DRR130174 Pre-XDR-TB lineage2.2.1 None
SRR10869264 Pre-XDR-TB lineage2.2.2 None
ERR10796641 MDR-TB lineage2.2.1 None
SRR1183090 Pre-XDR-TB lineage4.1.1.3 None
ERR11488904 MDR-TB lineage4.1.1.3 None
ERR117460 MDR-TB lineage2.2.1 ru
SRR4034390 MDR-TB lineage4.1.2.1 za
ERR11488560 MDR-TB lineage4.1.1.3 None
ERR4830123 MDR-TB lineage2.2.1 None
SRR9971128 MDR-TB lineage4.1.1.3 None
SRR1167338 MDR-TB lineage4.1.1.3 None
ERR4809172 MDR-TB lineage4.1.1.3 za
ERR4830531 MDR-TB lineage4.1.1.3 None
ERR8774397 MDR-TB lineage4.1.1.3 None
SRR15316317 MDR-TB lineage2.2.1 None
ERR9806681 Pre-XDR-TB lineage2.2.2 None
ERR11488551 MDR-TB lineage4.1.1.3 None
SRR21277281 Pre-XDR-TB lineage2.2.1 None
ERR4020196 MDR-TB lineage4.1.1.3 None
SRR21747063 MDR-TB lineage2.1 None
ERR9993034 MDR-TB lineage4.1.2.1 None
SAMN02403532 Pre-XDR-TB lineage4.1.1.3 za
ERR10748081 Pre-XDR-TB lineage2.2.2 None
SRR1167271 MDR-TB lineage4.1.1.3 None
SRR1169190 MDR-TB lineage4.1.1.3 None
ERR4797755 MDR-TB lineage3 in
SRR833128 Pre-XDR-TB lineage4.1.2.1 None
SRR7646014 MDR-TB lineage4.2.1 None
ERR10610314 MDR-TB lineage4.1.2.1 None
ERR4827921 MDR-TB lineage2.2.1 None
ERR5864653 MDR-TB lineage2.2.1 None
ERR11488586 Pre-XDR-TB lineage4.1.1.3 None
ERR4831801 MDR-TB lineage2.2.1 vn
ERR4799730 Pre-XDR-TB lineage2.2.1.1 in
ERR2516023 Pre-XDR-TB lineage4.1.2.1 za
ERR4831437 Pre-XDR-TB lineage3 None
ERR551467_ERR551466 MDR-TB lineage2.2.1 None
SRR10315667 MDR-TB lineage4.1.1.3 None
ERR2515588 Pre-XDR-TB lineage4.1.2.1 za
SRR25827648 Pre-XDR-TB lineage4.1.1.3 None
ERR2515479 Pre-XDR-TB lineage4.1.1.3 za
ERR4830057 MDR-TB lineage2.2.1 None
SRR1169256 MDR-TB lineage4.1.1.3 None
ERR4830532 MDR-TB lineage4.1.1.3 za
ERR4178299 MDR-TB lineage4.3.4.2 None
ERR553328 MDR-TB lineage4.1.1.3 None
ERR2200061 MDR-TB lineage4.1.1.3 None
ERR9806692 MDR-TB lineage4.1.1.3 None
SRR10315628 Pre-XDR-TB lineage4.1.2.1 None
SRR14782538 MDR-TB lineage4.2.1 None
ERR2515794 Pre-XDR-TB lineage4.1.1.3 za
SAMN02403577 MDR-TB lineage4.1.1.3 za
ERR11488677 Pre-XDR-TB lineage4.1.1.3 None
ERR4809073 MDR-TB lineage4.1.1.3 za
SRR1167366 MDR-TB lineage4.1.1.3 None
ERR9993121 XDR-TB lineage4.1.1.3 None
SRR1172247 MDR-TB lineage4.1.1.3 None
ERR4896315 Pre-XDR-TB lineage4.1.1.3 None
ERR2515826 Pre-XDR-TB lineage4.1.1.3 za
ERR550637 MDR-TB lineage4.1.1.3 None
SRR921502 Pre-XDR-TB lineage2.1;lineage2.2.1 None
ERR10610332 Pre-XDR-TB lineage2.2.2 None
SRR833032 MDR-TB lineage4.1.2.1 None
ERR6879023 MDR-TB lineage4.1.2.1 None
ERR4827563 MDR-TB lineage2.2.1 None
ERR4827436 Pre-XDR-TB lineage2.2.1 None
ERR9992853 XDR-TB lineage2.2.2 None
SRR671797 Pre-XDR-TB lineage2.2.2 cn
SRR21732333 Pre-XDR-TB lineage2.2.1 None
ERR9992645 XDR-TB lineage4.1.2.1 None
ERR551393 MDR-TB lineage4.1.1.3 sz
SRR1062841 Pre-XDR-TB lineage4.1.1.3 None
ERR1034724 MDR-TB lineage4.1.2.1 pe
SAMN02403576 Pre-XDR-TB lineage4.1.1.3 None
SAMN02585963 Pre-XDR-TB lineage4.1.1.3 za
SRR25206955 Pre-XDR-TB lineage2.2.1 None
SRR4034393 MDR-TB lineage4.1.2.1 None
ERR9119645 MDR-TB lineage4.6.2.2 None
SAMN02053783 MDR-TB lineage4.1.2.1 za
SAMN02350483 Pre-XDR-TB lineage4.1.1.3 za
SRR1167266 MDR-TB lineage4.1.1.3 None
ERR10680049 RR-TB lineage5.3 None
ERR553185 MDR-TB lineage4.1.1.3 None
DRR130087 Pre-XDR-TB lineage4.3.4.1 None
ERR8025448 Pre-XDR-TB lineage2.2.2 None
SRR9971048 MDR-TB lineage4.1.1.3 None
ERR751597 MDR-TB lineage4.3.4.2 pe
ERR11798751 MDR-TB lineage4.2.1 None
ERR12117896 MDR-TB lineage4.3.4.2 None
SRR9971038 MDR-TB lineage4.1.1.3 None
SRR10040333 RR-TB lineage4.4.2 None
ERR6865544 MDR-TB lineage4.3.4.2 None
ERR550734 MDR-TB lineage4.1.1.3 sz
SRR16370614 MDR-TB lineage2.2.1 None
ERR9806800 MDR-TB lineage4.1.2.1 None
SAMN02231173 MDR-TB lineage4.1.3 None
ERR4020195 Pre-XDR-TB lineage4.1.1.3 None
ERR9992674 XDR-TB lineage4.1.2.1 None
ERR2515199 Pre-XDR-TB lineage4.1.2.1 za
SRR6397471 XDR-TB lineage2.2.1 ca
ERR9993086 XDR-TB lineage4.1.2.1 None
ERR7362003 Pre-XDR-TB lineage2.2.2 None
ERR551466 MDR-TB lineage2.2.1 None
SRR998799 MDR-TB lineage4.1.3 None
SRR1167368 MDR-TB lineage4.1.1.3 None
ERR5864654 MDR-TB lineage2.2.1 None
SRR1169204 MDR-TB lineage4.1.1.3 None
ERR4827816 RR-TB lineage2.2.1 None
SRR9971281 Pre-XDR-TB lineage4.1.2.1 None
ERR10748222 MDR-TB lineage4.1.2.1 None
ERR553330 MDR-TB lineage4.1.1.3 None
ERR11488372 Pre-XDR-TB lineage1.2.2.2 None
SRR9971237 Pre-XDR-TB lineage4.1.1.3 None
ERR551240 MDR-TB lineage4.1.1.3 None
ERR4799853 Pre-XDR-TB lineage2.2.1.1 in
SRR1169203 Pre-XDR-TB lineage4.1.1.3 None
ERR553205 MDR-TB lineage4.1.1.3 None
SRR1183124 Pre-XDR-TB lineage4.1.2.1 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR8976092 XDR-TB lineage2.2.2 None
ERR4799787 MDR-TB lineage3 None
ERR553204 MDR-TB lineage4.1.1.3 sz
ERR11488464 MDR-TB lineage4.1.1.3 None
ERR9993190 XDR-TB lineage2.2.2 None
SRR847790 Pre-XDR-TB lineage4.1.1.3 za
ERR552075 MDR-TB lineage4.1.1.3 None
SRR25207363 MDR-TB lineage4.2.2 None
ERR552151 MDR-TB lineage4.1.1.3 sz
SRR833056 MDR-TB lineage4.1.1.3 None
SRR2101482 MDR-TB lineage4.1.2.1 None
ERR7361958 Pre-XDR-TB lineage4.1.1.3 None
SRR13870400 Pre-XDR-TB lineage4.3.4.2 None
SRR8363890 MDR-TB lineage2.2.1 None
ERR552296 Pre-XDR-TB lineage4.1.1.3 sz
ERR11488784 Pre-XDR-TB lineage4.1.1.3 None
SRR9971183 Pre-XDR-TB lineage4.1.2.1 None
ERR5864650 MDR-TB lineage2.2.1 None
SAMN03246476 Pre-XDR-TB lineage2.2.1 cn
ERR9993046 XDR-TB lineage2.2.2 None
ERR9993037 XDR-TB lineage4.1.1.3 None
ERR551467 MDR-TB lineage2.2.1 None
ERR5864651 MDR-TB lineage2.2.1 None
ERR12117964 MDR-TB lineage4.3.4.2 None
ERR4813057 MDR-TB lineage4.3.4.2 None
SAMN02586027 Pre-XDR-TB lineage4.1.1.3 za
SRR5535825 MDR-TB lineage4.6.2.2 None
SRR1172250 Pre-XDR-TB lineage2.2.1 None
SRR6511596 MDR-TB lineage2.2.1 None
ERR11488954 XDR-TB lineage4.1.1.3 None
SRR9971151 MDR-TB lineage4.3.2.1 None
SRR2101360 MDR-TB lineage4.1.2.1 None
SRR11662240 MDR-TB lineage2.2.1 None
ERR11466358 MDR-TB lineage4.1.1.3 None
SRR833194 MDR-TB lineage4.1.2.1 None
SRR1173407 MDR-TB lineage4.1.1.3 None
SAMN02585972 Pre-XDR-TB lineage4.1.2.1 za
ERR10610374 MDR-TB lineage4.1.1.3 None
ERR2515667 Pre-XDR-TB lineage4.1.2.1 za
SRR7653083 Pre-XDR-TB lineage2.2.1 None
DRR130088 Pre-XDR-TB lineage4.3.4.1 None
ERR4872199 MDR-TB lineage4.8 None
ERR2516722 RR-TB lineage4.8 nl
SRR21732547 MDR-TB lineage4.1.2.1 None
ERR5865962 Pre-XDR-TB lineage2.2.1 None
ERR3287840 MDR-TB lineage4.3.4.2 pe
SRR25207335 MDR-TB lineage2.2.1 None
ERR11488409 MDR-TB lineage4.1.1.3 None
SRR1169189 MDR-TB lineage4.1.1.3 None
SRR1165328 MDR-TB lineage4.1.1.3;lineage4.8 None
ERR12117975 MDR-TB lineage4.3.4.2 None
ERR553329 RR-TB lineage4.1.1.3 None
SRR22873596 Pre-XDR-TB lineage2.2.2 None
ERR5987202 MDR-TB lineage2.2.2 None
SRR1173624 MDR-TB lineage4.1.1.3 None
ERR4020190 MDR-TB lineage4.1.1.3 None
ERR8774356 Pre-XDR-TB lineage2.2.1 None
SRR1173737 MDR-TB lineage4.1.1.3 None
ERR552182 MDR-TB lineage4.1.1.3 None
ERR2199751 MDR-TB lineage4.1.1.3 None
ERR9992807 XDR-TB lineage2.2.2 None
ERR7911682 Pre-XDR-TB lineage4.1.2.1 za
SRR833038 Pre-XDR-TB lineage4.1.2.1 None
SRR1181092 Pre-XDR-TB lineage4.1.2.1 None
ERR11488862 Pre-XDR-TB lineage4.1.1.3 None
ERR3287746 HR-TB lineage4.3.4.1 pe
SRR12420578 MDR-TB lineage2.2.1 None
ERR553264 MDR-TB lineage4.1.1.3 sz
SRR25389430 Pre-XDR-TB lineage2.2.1 None
ERR2515739 Pre-XDR-TB lineage4.1.2.1 za
ERR4797061 Pre-XDR-TB lineage2.2.1.1 in
SRR1723539 MDR-TB lineage2.2.1 None
SRR26331642 MDR-TB lineage4.1.1.3 None
ERR10748163 Pre-XDR-TB lineage4.1.2.1 None
ERR11488546 Pre-XDR-TB lineage4.1.1.3 None
ERR8975780 Pre-XDR-TB lineage2.2.2 None
ERR11488649 MDR-TB lineage4.1.1.3 None
ERR7737700 MDR-TB lineage4.1.2.1 None
ERR9993054 XDR-TB lineage4.1.1.3 None
SRR1169063 Pre-XDR-TB lineage2.2.1 None
ERR4811352 MDR-TB lineage2.2.1 cn
ERR11488733 MDR-TB lineage4.1.1.3 None
SRR12882236 MDR-TB lineage1.1.3.2 None
ERR5864655 MDR-TB lineage2.2.1 None
SAMN02403525 Pre-XDR-TB lineage4.1.1.3 None
ERR11488499 Pre-XDR-TB lineage4.1.1.3 None
ERR4829735 MDR-TB lineage4.1.2.1 it
SRR28394259 MDR-TB lineage4.3.3 None
SRR28046126 Pre-XDR-TB lineage4.1.1.3 None
SRR28044449 Pre-XDR-TB lineage1.2.2.2 None
SRR8651652 MDR-TB lineage2.1 cn
ERR9992876 XDR-TB lineage2.2.2 None
ERR4808898 MDR-TB lineage2.2.2 None
SAMN02053805 MDR-TB lineage4.3.3 za
ERR2864235 MDR-TB lineage2.2.1 pt
ERR10395964 MDR-TB lineage2.2.1 None
SRR2101574 Pre-XDR-TB lineage4.1.2.1 None
ERR5865737 MDR-TB lineage2.2.1 None
SRR1172330 MDR-TB lineage4.1.1.3 None
ERR550813 MDR-TB lineage4.1.1.3 sz
SAMEA2533962 MDR-TB lineage2.2.1 uz
ERR9992924 Pre-XDR-TB lineage4.1.1.3 None
SAMN02403545 Pre-XDR-TB lineage4.1.1.3 None
ERR2516874 MDR-TB lineage3 gb
ERR2515264 Pre-XDR-TB lineage4.1.2.1 za
ERR1036296 Pre-XDR-TB lineage4.3.4.2 pt
SAMN02350472 MDR-TB lineage4.1.1.3 za
SRR6896411 MDR-TB lineage4.1.2.1 None
ERR2199778 MDR-TB lineage4.1.1.3 None
ERR11488403 MDR-TB lineage4.1.2.1 None
ERR6866070 MDR-TB lineage4.3.4.2 None
ERR4828049 Pre-XDR-TB lineage2.2.1 None
ERR4020192 MDR-TB lineage4.1.1.3 None
ERR552361 MDR-TB lineage4.1.1.3 sz
SRR998796 MDR-TB lineage4.1.3 None
ERR7911372 MDR-TB lineage4.3.4.2 pe
ERR4809200 MDR-TB lineage4.1.1.3 za
SRR7781497 Pre-XDR-TB lineage4.4.1.1 None
SRR5709819 MDR-TB lineage1.1.1 th
SRR4034386 MDR-TB lineage4.1.2.1 za
ERR4827417 MDR-TB lineage2.2.1 None
ERR553028 MDR-TB lineage4.1.1.3 sz
ERR4809065 MDR-TB lineage4.1.1.3 za
SAMN02053765 MDR-TB lineage4.1.1.3 za
ERR552181 MDR-TB lineage4.1.1.3 None
SRR9971101 XDR-TB lineage4.1.2.1 None
ERR3287465 MDR-TB lineage4.3.4.2 pe
SRR1166916 Pre-XDR-TB lineage2.2.1 None
ERR9992981 XDR-TB lineage2.2.2 None
ERR4830549 MDR-TB lineage4.1.1.3 None
SAMN02585992 Pre-XDR-TB lineage4.1.1.3 za
SRR11349150 MDR-TB lineage4.1.1.3 None
SRR10809123 MDR-TB lineage4.1.2.1 None
ERR10748250 XDR-TB lineage4.1.2.1 None
ERR9119597 MDR-TB lineage4.8 None
ERR5865855 Pre-XDR-TB lineage2.2.1 None
ERR11488513 Pre-XDR-TB lineage4.1.1.3 None
ERR2516884 MDR-TB lineage4.2.2 gb
ERR551938 MDR-TB lineage4.1.1.3 sz
SRR6207282 MDR-TB lineage4.1.2.1 None
SAMN02585970 Pre-XDR-TB lineage4.1.1.3 za
SRR11972304 MDR-TB lineage2.2.1.1 None
ERR11082293 Pre-XDR-TB lineage2.2.2 None
DRR130188 Pre-XDR-TB lineage4.3.4.1 None
ERR2516188 MDR-TB lineage2.2.1 be
ERR2515386 MDR-TB lineage4.1.1.3 za
ERR9806894 Pre-XDR-TB lineage4.1.2.1 None
SRR25389422 Pre-XDR-TB lineage2.2.1 None
SRR9971345 Pre-XDR-TB lineage4.1.2.1 None
ERR4810965 MDR-TB lineage2.2.2 cn
ERR7361990 Pre-XDR-TB lineage4.1.1.3 None
ERR5865856 Pre-XDR-TB lineage2.2.1 None
ERR439973 MDR-TB lineage5.1.4 None
ERR751427 MDR-TB lineage4.3.4.2 pe
SRR1173736 MDR-TB lineage4.1.1.3 None
ERR553343 MDR-TB lineage4.1.1.3 sz
SRR6511590 MDR-TB lineage2.2.1 None
ERR10748569 MDR-TB lineage2.2.1 None
SAMN02053753 MDR-TB lineage4.1.2.1 za
ERR2199988 MDR-TB lineage4.1.1.3 None
SRR1165714 MDR-TB lineage4.1.1.3 None
SRR1169241 HR-TB lineage4.1.1.3 None
SRR10869283 Pre-XDR-TB lineage2.2.2 None
SRR1167333 MDR-TB lineage4.1.1.3 None
ERR9992808 XDR-TB lineage2.2.2 None
ERR8975791 Pre-XDR-TB lineage2.2.2 None
ERR2516924 MDR-TB lineage4.2.2 gb
ERR9992929 XDR-TB lineage4.1.1.3 None
ERR4798726 Pre-XDR-TB lineage2.2.1.1 in
ERR7737696 Pre-XDR-TB lineage4.1.2.1 None
ERR11488416 MDR-TB lineage4.1.1.3 None
SRR28498572 MDR-TB lineage4.2.1 None
SRR28393936 MDR-TB lineage4.3.4.2 None
SRR28394178 MDR-TB lineage2.2.1 None
SRR28393631 MDR-TB lineage2.2.1 None
SRR28044931 Pre-XDR-TB lineage1.2.2.2 None
ERR11773716 Pre-XDR-TB lineage4.1.2.1 None
ERR11773811 Pre-XDR-TB lineage2.2.1 None
ERR11773707 Pre-XDR-TB lineage4.1.1.3 None
ERR1034613 Pre-XDR-TB lineage3 pk
ERR2510294 Pre-XDR-TB lineage3 pk
ERR4831443 Pre-XDR-TB lineage3.1.2 pk
SAMN02403523 MDR-TB lineage4.1.1.3 za
ERR551246 MDR-TB lineage4.1.1.3 sz
ERR553053 MDR-TB lineage4.1.2.1 sz
ERR552074 MDR-TB lineage4.1.1.3 None
SRR10869257 MDR-TB lineage2.2.2 None
ERR1873505 MDR-TB lineage2.2.2 za
ERR11488437 Pre-XDR-TB lineage4.1.1.3 None
SRR9971331 MDR-TB lineage4.1.1.3 None
ERR11488878 Pre-XDR-TB lineage4.1.1.3 None
ERR552751 MDR-TB lineage4.1.1.3 sz
SRR9971246 MDR-TB lineage4.1.1.3 None
ERR9992638 XDR-TB lineage4.1.1.3 None
SRR1723748 Pre-XDR-TB lineage2.2.1 None
SRR1181322 Pre-XDR-TB lineage4.1.1.3 None
SRR6397784 MDR-TB lineage2.2.1 ca
ERR5758389 MDR-TB lineage2.2.2 None
ERR9992854 XDR-TB lineage4.1.2.1 None
SAMN02350424 Pre-XDR-TB lineage4.1.1.3 za
ERR8976048 Pre-XDR-TB lineage4.1.1.3 None
ERR4020193 MDR-TB lineage4.1.1.3 None
SRR1723749 Pre-XDR-TB lineage2.2.1 None
SRR28393639 MDR-TB lineage4.3.4.2 None
SRR28393568 MDR-TB lineage4.3.4.2 None
SRR28393641 MDR-TB lineage4.3.4.2 None
ERR11773741 Pre-XDR-TB lineage4.1.2.1 None
ERR11773802 Pre-XDR-TB lineage2.2.1 None
ERR11773743 XDR-TB lineage4.1.1.3 None
SRR28393278 MDR-TB lineage4.1.2.1 None
ERR11775345 MDR-TB lineage4.1.2.1 None
SRR22461607 MDR-TB lineage4.3.4.2 None
SAMN01925645 Pre-XDR-TB lineage4.1.1.3 None
ERR5897119 Pre-XDR-TB lineage3 None
ERR8975846 XDR-TB lineage2.2.2 None
ERR7911176 MDR-TB lineage2.2.1 vn
SRR1173587 Pre-XDR-TB lineage4.1.1.3 None
SRR7517822 Pre-XDR-TB lineage2.2.1 ch
SRR1169301 Pre-XDR-TB lineage4.1.1.3 None
SRR1181284 Pre-XDR-TB lineage4.1.2.1 None