Rv3794 - c.-16C>G

Drug resistance types
0 Sensitive 3 RR-TB 3 HR-TB 128 MDR-TB 84 Pre-XDR-TB 0 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.1.1.3 70
lineage4.3.4.1 1
lineage3 8
lineage2.2.1 41
lineage4.1.2.1 42
lineage2.2.2 15
lineage2.2.1.1 5
lineage4.3.4.2 15
lineage4.2.2 3
lineage2.2 1
lineage4.2.1 1
lineage4.3.3 3
lineage4.4.2 2
lineage4.2.2.1 1
lineage4.8 3
lineage2.1 1
lineage4.4.1.1 2
lineage1.2.2.2 1
lineage4.1.2.1;lineage2.2.1 1
lineage1.1.1 1
lineage3.1.2 1
spoligotype Counts
spoligotype Count
None 218
Geographic prevalence
Country level data for this variant is available for 171 isolates.
Statisctical support
Not enough data to calculate support.
ID Drug resistance Lineage Country iso2
SAMN02403532 Pre-XDR-TB lineage4.1.1.3 za
ERR3287746 HR-TB lineage4.3.4.1 pe
SAMN02585970 Pre-XDR-TB lineage4.1.1.3 za
ERR4797755 MDR-TB lineage3 in
ERR2516188 MDR-TB lineage2.2.1 be
ERR2515739 Pre-XDR-TB lineage4.1.2.1 za
ERR553264 MDR-TB lineage4.1.1.3 sz
ERR552751 MDR-TB lineage4.1.1.3 sz
ERR2510294 Pre-XDR-TB lineage3 pk
ERR2515386 MDR-TB lineage4.1.1.3 za
ERR4810965 MDR-TB lineage2.2.2 cn
ERR4797061 Pre-XDR-TB lineage2.2.1.1 in
ERR2515262 Pre-XDR-TB lineage4.1.1.3 None
SRR1723539 MDR-TB lineage2.2.1 None
ERR8975791 Pre-XDR-TB lineage2.2.2 None
ERR553343 MDR-TB lineage4.1.1.3 sz
SAMN02053753 MDR-TB lineage4.1.2.1 za
ERR8975780 Pre-XDR-TB lineage2.2.2 None
ERR751427 MDR-TB lineage4.3.4.2 pe
SRR6397784 MDR-TB lineage2.2.1 ca
SAMN02350424 Pre-XDR-TB lineage4.1.1.3 za
ERR2516924 MDR-TB lineage4.2.2 gb
ERR4811352 MDR-TB lineage2.2.1 cn
SAMN02403542 MDR-TB lineage4.1.1.3 za
ERR7361983 Pre-XDR-TB lineage4.1.1.3 None
ERR4829735 MDR-TB lineage4.1.2.1 it
ERR10796641 MDR-TB lineage2.2 None
SAMN02403525 Pre-XDR-TB lineage4.1.1.3 None
ERR4798726 Pre-XDR-TB lineage2.2.1.1 in
ERR8976048 Pre-XDR-TB lineage4.1.1.3 None
ERR4808898 MDR-TB lineage2.2.2 None
SRR23310935 MDR-TB lineage4.2.1 None
ERR7911176 MDR-TB lineage2.2.1 vn
ERR551246 MDR-TB lineage4.1.1.3 sz
ERR550813 MDR-TB lineage4.1.1.3 sz
ERR553053 MDR-TB lineage4.1.2.1 sz
SRR7517822 Pre-XDR-TB lineage2.2.1 ch
ERR2864235 MDR-TB lineage2.2.1 pt
SRR2101574 Pre-XDR-TB lineage4.1.2.1 None
SAMN02053805 MDR-TB lineage4.3.3 za
ERR1873505 MDR-TB lineage2.2.2 za
ERR4831801 MDR-TB lineage2.2.1 vn
SAMEA2533962 MDR-TB lineage2.2.1 uz
SRR4034388 MDR-TB lineage4.1.2.1 za
ERR550636 MDR-TB lineage4.1.1.3 None
ERR550864 MDR-TB lineage4.1.1.3 sz
SRR671725 MDR-TB lineage4.4.2 cn
ERR4831259 MDR-TB lineage4.2.2.1 de
ERR4799730 Pre-XDR-TB lineage2.2.1.1 in
ERR2515542 MDR-TB lineage4.1.2.1 za
ERR2516023 Pre-XDR-TB lineage4.1.2.1 za
ERR4831908 MDR-TB lineage2.2.1 vn
ERR751437 MDR-TB lineage4.3.3 pe
ERR2864252 MDR-TB lineage2.2.1 pt
ERR2515588 Pre-XDR-TB lineage4.1.2.1 za
ERR553216 MDR-TB lineage4.1.2.1 sz
ERR552994 MDR-TB lineage4.1.1.3 sz
ERR4811666 MDR-TB lineage4.3.4.2 pe
ERR2515479 Pre-XDR-TB lineage4.1.1.3 za
ERR4830057 MDR-TB lineage2.2.1 None
ERR4830532 MDR-TB lineage4.1.1.3 za
ERR4831245 Pre-XDR-TB lineage2.2.1 None
ERR553328 MDR-TB lineage4.1.1.3 None
ERR2516017 MDR-TB lineage4.1.2.1 za
ERR553354 MDR-TB lineage4.1.1.3 sz
ERR5918126 MDR-TB lineage2.2.2 za
ERR751574 MDR-TB lineage4.3.4.2 pe
SRR671861 MDR-TB lineage4.4.2 cn
ERR553186 MDR-TB lineage4.1.1.3 sz
ERR4830117 MDR-TB lineage2.2.1 None
SRR6397708 MDR-TB lineage2.2.1 ca
SRR6397730 MDR-TB lineage2.2.1 ca
SAMN02403577 MDR-TB lineage4.1.1.3 za
ERR2515794 Pre-XDR-TB lineage4.1.1.3 za
ERR2515826 Pre-XDR-TB lineage4.1.1.3 za
ERR4809073 MDR-TB lineage4.1.1.3 za
ERR2516878 MDR-TB lineage3 gb
SRR6256986 MDR-TB lineage2.2.1 ru
ERR4812958 MDR-TB lineage4.3.3 pe
ERR4813367 Pre-XDR-TB lineage4.1.2.1 None
SAMEA2533860 HR-TB lineage2.2.1 None
SRR671842 Pre-XDR-TB lineage2.2.1 cn
ERR4808893 Pre-XDR-TB lineage2.2.2 za
SRR6824645 Pre-XDR-TB lineage2.2.1 cn
ERR4830134 MDR-TB lineage2.2.1 None
ERR8975739 Pre-XDR-TB lineage4.1.1.3 None
SRR671797 Pre-XDR-TB lineage2.2.2 cn
ERR551241 MDR-TB lineage4.1.1.3 sz
SAMN02403541 MDR-TB lineage4.1.1.3 za
ERR551393 MDR-TB lineage4.1.1.3 sz
ERR4808875 Pre-XDR-TB lineage2.2.2 za
SAMN02350428 Pre-XDR-TB lineage4.1.1.3 za
SAMN02403576 Pre-XDR-TB lineage4.1.1.3 None
ERR2516045 Pre-XDR-TB lineage4.1.2.1 za
ERR1036286 MDR-TB lineage2.2.1 pt
ERR2515982 MDR-TB lineage4.1.2.1 za
SAMN02350483 Pre-XDR-TB lineage4.1.1.3 za
ERR1034724 MDR-TB lineage4.1.2.1 pe
SAMN02585963 Pre-XDR-TB lineage4.1.1.3 za
SRR5073654 MDR-TB lineage2.2.1 vn
SRR4034393 MDR-TB lineage4.1.2.1 None
SAMN02053783 MDR-TB lineage4.1.2.1 za
SRR4034389 MDR-TB lineage4.1.2.1 za
SRR4034387 MDR-TB lineage4.1.2.1 za
SAMN02403522 MDR-TB lineage4.1.1.3 za
ERR751597 MDR-TB lineage4.3.4.2 pe
ERR550734 MDR-TB lineage4.1.1.3 sz
ERR4830099 Pre-XDR-TB lineage2.2.1 None
SRR6824451 MDR-TB lineage2.2.1 cn
ERR2515597 Pre-XDR-TB lineage4.1.1.3 za
ERR553105 MDR-TB lineage4.1.1.3 sz
ERR4810958 MDR-TB lineage4.2.2 cn
ERR4811292 Pre-XDR-TB lineage2.2.1 cn
ERR3287599 HR-TB lineage4.1.2.1 pe
ERR8975755 Pre-XDR-TB lineage2.2.2 None
ERR1034826 MDR-TB lineage2.2.1 pt
ERR3287372 MDR-TB lineage4.1.2.1 pe
ERR4797047 Pre-XDR-TB lineage2.2.1.1 in
ERR2515199 Pre-XDR-TB lineage4.1.2.1 za
ERR2515346 MDR-TB lineage4.1.1.3 za
ERR4830043 MDR-TB lineage2.2.1 None
ERR2864296 MDR-TB lineage2.2.1 pt
ERR1034613 Pre-XDR-TB lineage3 pk
ERR2516439 RR-TB lineage4.8 nl
SRR6397471 Pre-XDR-TB lineage2.2.1 ca
ERR2516091 Pre-XDR-TB lineage4.1.2.1 za
ERR552720 MDR-TB lineage4.1.1.3 sz
ERR7911309 MDR-TB lineage2.2.1 vn
ERR2515583 MDR-TB lineage4.1.2.1 za
SAMN02403546 MDR-TB lineage4.1.1.3 za
SAMN02585961 Pre-XDR-TB lineage4.1.2.1 za
ERR4799853 Pre-XDR-TB lineage2.2.1.1 in
ERR552917 MDR-TB lineage4.1.1.3 sz
ERR4810928 Pre-XDR-TB lineage2.2.1 cn
ERR8976092 Pre-XDR-TB lineage2.2.2 None
ERR400517 Pre-XDR-TB lineage2.2.1 gb
SRR8651652 MDR-TB lineage2.1 cn
ERR553204 MDR-TB lineage4.1.1.3 sz
ERR4828973 MDR-TB lineage4.4.1.1 None
SAMN02403533 MDR-TB lineage4.1.1.3 za
ERR4830114 Pre-XDR-TB lineage2.2.1 tj
ERR4796484 Pre-XDR-TB lineage1.2.2.2 in
SRR847790 Pre-XDR-TB lineage4.1.1.3 za
ERR1036294 Pre-XDR-TB lineage4.3.4.2 pt
ERR552075 MDR-TB lineage4.1.1.3 None
ERR4808905 Pre-XDR-TB lineage2.2.2 za
ERR552151 MDR-TB lineage4.1.1.3 sz
ERR1034852 Pre-XDR-TB lineage4.3.4.2 pt
SRR2101482 MDR-TB lineage4.1.2.1 None
ERR751559 MDR-TB lineage4.3.4.2 pe
ERR8665610 Pre-XDR-TB lineage2.2.1 None
ERR3287454 MDR-TB lineage4.3.4.2 pe
ERR4808894 Pre-XDR-TB lineage2.2.2 za
ERR751496 MDR-TB lineage4.3.4.2 pe
ERR4831458 MDR-TB lineage3 None
ERR552296 Pre-XDR-TB lineage4.1.1.3 sz
ERR4809252 MDR-TB lineage4.1.2.1 za
ERR2433008 Pre-XDR-TB lineage4.1.1.3 None
ERR4809202 MDR-TB lineage4.1.1.3 za
SAMN03246476 Pre-XDR-TB lineage2.2.1 cn
SRR4034391 MDR-TB lineage4.1.2.1 None
ERR2515425 Pre-XDR-TB lineage4.1.1.3 za
ERR4831429 Pre-XDR-TB lineage3 None
ERR2516653 RR-TB lineage4.8 nl
ERR4799644 Pre-XDR-TB lineage3 in
SRR2101360 MDR-TB lineage4.1.2.1 None
ERR8975846 Pre-XDR-TB lineage2.2.2 None
ERR4796733 Pre-XDR-TB lineage4.1.1.3 in
ERR4822321 Pre-XDR-TB lineage2.2.1 de
ERR4813057 MDR-TB lineage4.3.4.2 None
SAMN02586027 Pre-XDR-TB lineage4.1.1.3 za
ERR2515255 Pre-XDR-TB lineage4.1.2.1;lineage2.2.1 za
ERR2515361 Pre-XDR-TB lineage4.1.2.1 za
ERR2515135 Pre-XDR-TB lineage4.1.2.1 za
ERR5918116 Pre-XDR-TB lineage4.1.2.1 za
ERR8975696 Pre-XDR-TB lineage4.1.2.1 None
ERR2515990 Pre-XDR-TB lineage4.1.1.3 za
ERR3287541 MDR-TB lineage4.1.2.1 None
ERR2515667 Pre-XDR-TB lineage4.1.2.1 za
ERR8976096 MDR-TB lineage4.1.2.1 None
SAMN02585972 Pre-XDR-TB lineage4.1.2.1 za
ERR552288 MDR-TB lineage4.1.1.3 sz
ERR3287752 MDR-TB lineage4.3.4.2 pe
ERR552073 MDR-TB lineage4.1.1.3 sz
SAMN02350472 MDR-TB lineage4.1.1.3 za
SAMN02403545 Pre-XDR-TB lineage4.1.1.3 None
ERR2516874 MDR-TB lineage3 gb
ERR2515264 Pre-XDR-TB lineage4.1.2.1 za
SAMN02403523 MDR-TB lineage4.1.1.3 za
ERR1036296 Pre-XDR-TB lineage4.3.4.2 pt
ERR3287840 MDR-TB lineage4.3.4.2 pe
ERR2516722 RR-TB lineage4.8 nl
ERR550959 MDR-TB lineage4.1.1.3 sz
ERR552361 MDR-TB lineage4.1.1.3 sz
ERR7911372 MDR-TB lineage4.3.4.2 pe
ERR4809200 MDR-TB lineage4.1.1.3 za
ERR553028 MDR-TB lineage4.1.1.3 sz
SRR5709819 MDR-TB lineage1.1.1 th
SRR4034386 MDR-TB lineage4.1.2.1 za
ERR8975976 Pre-XDR-TB lineage2.2.2 None
ERR3287465 MDR-TB lineage4.3.4.2 pe
SAMN02419604 Pre-XDR-TB lineage2.2.1 by
ERR1034857 MDR-TB lineage2.2.1 pt
ERR4831443 Pre-XDR-TB lineage3.1.2 pk
ERR4809065 MDR-TB lineage4.1.1.3 za
SAMN02053765 MDR-TB lineage4.1.1.3 za
ERR8975760 Pre-XDR-TB lineage4.1.2.1 None
ERR117460 MDR-TB lineage2.2.1 ru
ERR4828845 Pre-XDR-TB lineage4.4.1.1 None
ERR552182 MDR-TB lineage4.1.1.3 None
SAMN02585992 Pre-XDR-TB lineage4.1.1.3 za
SRR4034390 MDR-TB lineage4.1.2.1 za
ERR4809172 MDR-TB lineage4.1.1.3 za
ERR4830531 MDR-TB lineage4.1.1.3 None
ERR2516884 MDR-TB lineage4.2.2 gb
ERR4830123 MDR-TB lineage2.2.1 None
ERR7911682 Pre-XDR-TB lineage4.1.2.1 za
ERR551938 MDR-TB lineage4.1.1.3 sz