Rv0006 - c.-977C>G
Drug resistance types
20 Sensitive
1 RR-TB
74 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3;lineage2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1 | 1 |
| 51 | |
| lineage4.1.1.3 | 2 |
| lineage4 | 16 |
| lineage4.1.1 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage3 | 2 |
| lineage4.1.2.1 | 11 |
| lineage4.1.1.2 | 1 |
| lineage4.9 | 18 |
| lineage1.1 | 1 |
| lineage2.2.1 | 2 |
| lineage4.6.4 | 2 |
| lineage3.1 | 2 |
| lineage2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2 | 3 |
| La1 | 1 |
| La1.8.1 | 3 |
| lineage6 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.3.4 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 133 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR6650117 | Sensitive | lineage4.4.1.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4815550 | Other | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4821053 | Other | lineage3 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR6046385 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | ERR2693239 | HR-TB | None | SRR5535933 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | ERR2517528 | Other | lineage3 | nl | ERR3077978 | Other | lineage1.1 | None | SRR6325442 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR294248 | HR-TB | None | SRR6832171 | Pre-XDR-TB | lineage2 | None | ERR323038 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR5311099 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR5311081 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR5311090 | HR-TB | None | ERR323041 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063862 | HR-TB | None | ERR3283017 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3468544 | HR-TB | None | ERR369156 | Sensitive | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797083 | HR-TB | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797060 | Other | La1.8.1 | None | ERR4024991 | Other | None | ERR4769457 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR9787030 | Sensitive | lineage6 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR4797264 | Sensitive | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR6866022 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR13837697 | HR-TB | lineage4.9 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13837684 | Sensitive | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR13837519 | Sensitive | lineage4.9 | None | SRR13837544 | Sensitive | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR13861266 | Sensitive | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None |
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