Rv1221 - c.588G>A
Drug resistance types
2 Sensitive
3 RR-TB
25 HR-TB
3 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.9 | 22 |
| lineage4 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| 2 | |
| La1;lineage4.9 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage1.1.3.1 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 3 |
| lineage4.3.4.1 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage2.2.1 | 1 |
| La3;lineage2 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR9786843 | Other | None | SRR28119777 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR16096980 | Sensitive | lineage1.1.3.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2446566 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR28393388 | MDR-TB | lineage4.3.4.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR16096987 | Sensitive | lineage1.1.3.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR25827682 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None |
|---|
