Rv0006 - c.1236G>A
Drug resistance types
3 Sensitive
2 RR-TB
66 HR-TB
7 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| 65 | |
| lineage2.2.1 | 6 |
| lineage4 | 4 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 10 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.3.3 | 3 |
| lineage4.9 | 9 |
| La1.8.1 | 2 |
| lineage4.3.2 | 1 |
| La1.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
| lineage1.1.1 | 1 |
| lineage3 | 1 |
| lineage4.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 116 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2693231 | Other | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | ERR278594 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045053 | Other | None | SRR6045555 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6046046 | Other | None | ERR4828143 | Other | lineage2.2.1 | vn | SRR6045399 | Other | None | SRR6045233 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046397 | Other | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6046594 | HR-TB | lineage4 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR5311099 | HR-TB | None | SRR6325442 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323055 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR323107 | Other | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3797017 | Other | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR3797083 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR6198317 | Other | La1.2 | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736835 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861288 | Other | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR17658565 | Other | lineage3 | None | SRR1640750 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR6325445 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675234 | Other | None | SRR3675571 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212121 | HR-TB | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR4816466 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None |
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