Rv0006 - c.-737G>C

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
6 Sensitive 2 RR-TB 27 HR-TB 10 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 39 Other
lineage Counts
lineage Count
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 2
lineage4.9 14
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
13
lineage3 1
La3;M.canetti;lineage2.1;lineage4.9 2
M.canetti;lineage2.2 2
lineage2.1;lineage4.9 4
La1.6;lineage4 1
lineage4.9;lineage6.3 5
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage4.9 7
M.canetti;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage4.8 1
lineage2.1 1
lineage2.2.1 1
lineage4.1.1.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 1
lineage4.1.3 2
lineage4.6.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.1.1.1 2
La3;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2 1
La1.7;M.canetti;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
La3;lineage4 1
lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.4.1.2 1
lineage4.6.2.2 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 87
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1184294 Other lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR212001 HR-TB None
SRR28044873 Pre-XDR-TB lineage3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797048 Other La3;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR702406 Other lineage2.1 None
SRR28119811 Other lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786671 Other None
ERR9786604 Other None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR29097058 Other lineage4.9 None
ERR4811105 HR-TB None
ERR4819051 Sensitive lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR6358991 HR-TB None
ERR4811142 RR-TB None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR6358755 Other lineage4.6.1 None
ERR4811075 Other None
SRR3675236 Other None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR12416824 HR-TB None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR8217918 HR-TB lineage4.9 None
SRR6325447 HR-TB lineage4.1.1.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR6045010 Sensitive lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR6789626 Other None
SRR26159063 RR-TB lineage4.9 None
ERR4810741 HR-TB None
ERR4811311 Other None
SRR28119753 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR212138 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR3797064 Other La3;lineage4.9 None