lineage | Count |
---|---|
lineage4.9 | 6 |
lineage2.2.1 | 3 |
79 | |
lineage2.2 | 2 |
lineage4.3.4 | 1 |
lineage4.1 | 1 |
lineage4 | 19 |
lineage4.1.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage1.1 | 1 |
lineage4.1.2.1 | 4 |
lineage3.1 | 1 |
La1 | 1 |
lineage3 | 1 |
lineage4;lineage3.1 | 1 |
lineage4.3.2 | 1 |
lineage2.2.2 | 2 |
spoligotype | Count |
---|---|
None | 125 |
ID | Drug resistance | Lineage | Country iso2 | SRR13861566 | Other | lineage4.9 | None | SRR13837643 | Other | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675234 | Other | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None | SRR3675545 | HR-TB | None | ERR212123 | Other | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | SRR3675558 | HR-TB | None | ERR4816466 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4816656 | HR-TB | None | ERR1035138 | MDR-TB | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR2693231 | Other | None | SRR5341456 | Other | None | SRR6045503 | HR-TB | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6044838 | Other | lineage4.9 | None | ERR2693257 | Other | None | SRR6045706 | Sensitive | lineage4 | None | SRR6325442 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6045399 | Other | None | ERR278594 | HR-TB | None | SRR6046397 | Other | None | SRR6046362 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR294248 | HR-TB | None | ERR502889 | Other | None | ERR5311090 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | SRR8217918 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323063 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR067681 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR11044895 | Sensitive | lineage3 | None | ERR133986 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283024 | Other | None | ERR3439432 | Other | None | ERR363445 | Sensitive | lineage4 | None | ERR3468544 | HR-TB | None | ERR363426 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797061 | Other | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3994115 | Sensitive | lineage2.2.1 | None | ERR4769452 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4769450 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736835 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | ERR736839 | Other | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR1169306 | Other | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None |
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