lineage | Count |
---|---|
78 | |
lineage4 | 6 |
lineage2.2 | 4 |
lineage4.6.2.2 | 4 |
lineage6.1.3 | 1 |
lineage2.2.1 | 2 |
lineage2.2.1.1 | 3 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.1 | 1 |
lineage4.9 | 6 |
lineage4.3.4.2.1 | 1 |
lineage4.3 | 1 |
La1 | 1 |
spoligotype | Count |
---|---|
None | 109 |
ID | Drug resistance | Lineage | Country iso2 | ERR6358991 | HR-TB | None | ERR702404 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR702406 | HR-TB | None | ERR736865 | HR-TB | None | ERR736835 | HR-TB | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9787153 | Other | lineage6.1.3 | None | ERR181744 | HR-TB | None | SRR10808805 | Sensitive | None | SRR1172310 | HR-TB | None | SRR1173629 | Other | None | SRR1174897 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR12416824 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303884 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR212001 | HR-TB | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR6044790 | HR-TB | None | SRR3675574 | HR-TB | None | ERR2514692 | Other | None | ERR2693231 | Other | None | ERR2693230 | Other | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR3675555 | HR-TB | None | SRR3675571 | HR-TB | None | ERR1035138 | MDR-TB | None | SRR5341302 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6046225 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR8217918 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046492 | Other | None | SRR6046644 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR4831117 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR6046397 | Other | None | SRR6325448 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR5311090 | HR-TB | None | ERR502532 | HR-TB | None | ERR3283017 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797024 | Other | lineage4.9 | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797048 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797044 | Other | None | ERR3797069 | Other | None | ERR3797061 | Other | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR387051 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None |
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