Rv1854c - c.1083A>G


Drug resistance types
0 Sensitive 4 RR-TB 140 HR-TB 14 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 79 Other
lineage Counts
lineage Count
140
lineage4.1.2.1 9
lineage6 1
lineage4.1.3 2
lineage4.6.2.2 1
lineage2.2.2 2
lineage2 4
lineage4 12
La3 1
lineage4.4.1.1 3
lineage4.9 12
lineage2.2.1 11
lineage2.2.1.1 2
lineage2.2 3
lineage3.1 4
lineage4.3.3 1
lineage4.5 2
lineage2.1 2
lineage1.1.2 2
lineage4.1 1
lineage6.3;lineage4.9;lineage2.1 1
lineage3;lineage2.1 1
lineage4.1.1 1
lineage4.3 1
lineage4.1.1.3 1
lineage4.8;La3 1
lineage4.8 2
lineage4.1.2 1
La1.8.1 2
lineage4;lineage1.1 1
lineage4.7 2
lineage3 2
lineage1.1 1
La2 1
lineage4.3.4.2.1 2
La1 1
lineage3.1.2 1
lineage4.3.4 1
lineage4.1.2.1.1 1
lineage4.3.2 1
spoligotype Counts
spoligotype Count
None 240
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786604 Other None
ERR9786421 Other lineage4.1.2.1 None
ERR9787165 Other lineage6 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786843 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786682 Other lineage4.1.2.1 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
ERR9787197 Other None
SRR1162740 Other lineage4.1.2.1 None
SRR069981 HR-TB lineage2.2.2 None
SRR069989 HR-TB lineage2 None
SRR1169306 Other None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1167384 Other lineage4 None
SRR1169194 Other None
SRR1169249 Other La3 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1173629 Other None
SRR1172817 HR-TB None
SRR1172857 MDR-TB None
SRR1173153 HR-TB None
SRR1173363 HR-TB None
SRR1173384 Other lineage4 None
SRR1173484 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1172728 MDR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172951 Other None
SRR1173400 Other None
SRR1173633 HR-TB lineage4.9 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1173788 Other None
SRR1180172 Other lineage2.2.1 None
SRR1175074 MDR-TB None
SRR1180137 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1175049 RR-TB None
SRR1183145 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184372 MDR-TB None
SRR1184380 HR-TB None
SRR1184381 MDR-TB None
SRR1184388 Other None
SRR1196474 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196546 HR-TB None
SRR12142341 HR-TB None
SRR1196768 MDR-TB None
SRR12416824 HR-TB None
SRR13423544 Other lineage4.5 None
SRR13861434 RR-TB lineage4.9 None
SRR20969677 HR-TB lineage2 None
SRR15368973 Other None
SRR1640750 HR-TB None
SRR1710057 Other lineage2.1 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR19304036 HR-TB None
SRR13861439 RR-TB lineage4.9 None
SRR14782405 HR-TB None
SRR18213713 HR-TB lineage4.5 None
SRR19303884 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR4815604 HR-TB None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR3675221 HR-TB None
SRR3675465 HR-TB None
SRR3675488 HR-TB None
SRR3675486 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR176793 Other lineage4.1.1 None
SRR3675482 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR161033 HR-TB None
SRR3416776 Other lineage2.1 None
SRR3675501 HR-TB None
SRR3675222 Other None
SRR3675236 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675311 Other None
ERR176643 HR-TB None
ERR176751 HR-TB None
SRR3675312 HR-TB lineage4 None
SRR3675383 HR-TB None
SRR3675456 HR-TB None
SRR3675545 HR-TB None
SRR3675510 Other None
ERR4816999 Other None
ERR2027263 Other lineage4 None
ERR212034 HR-TB None
SRR3675555 HR-TB None
ERR212121 HR-TB None
SRR3675558 HR-TB None
ERR4817060 RR-TB None
SRR3675572 Other None
SRR3675574 HR-TB None
ERR212138 HR-TB lineage4 None
ERR4816466 HR-TB None
SRR3742665 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4816585 Other lineage2.2 None
ERR502912 Other lineage2.2.1 None
ERR4816656 HR-TB None
ERR4817893 Other lineage4.8;La3 None
ERR4817735 Other lineage4.8 None
ERR4818347 Other lineage4.1.2 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4818021 Other La1.8.1 None
ERR234659 HR-TB None
ERR4819781 Other lineage2.2.1 None
ERR4819322 Other lineage4;lineage1.1 None
ERR4820854 Other lineage4.1.2.1 None
ERR4818929 HR-TB None
ERR4818615 Other None
SRR5341432 HR-TB lineage4 None
ERR4819932 Other lineage4.7 None
SRR5341302 HR-TB None
SRR5341313 HR-TB None
SRR5535933 HR-TB None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
SRR6045503 HR-TB None
SRR6045526 HR-TB None
SRR5341333 HR-TB None
SRR6045555 HR-TB None
SRR6045519 HR-TB None
ERR278594 HR-TB None
SRR6044855 Other lineage4.9 None
SRR6046133 HR-TB None
SRR6044790 HR-TB None
SRR6045399 Other None
SRR6045217 Other lineage4 None
SRR6046066 HR-TB None
SRR6045952 HR-TB None
SRR6045233 HR-TB None
SRR6045327 HR-TB None
SRR6325444 HR-TB None
SRR6046225 HR-TB None
SRR6325442 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046397 Other None
SRR6046514 HR-TB None
ERR4830353 Other None
SRR6046594 HR-TB lineage4 None
SRR6046540 HR-TB None
SRR6325448 HR-TB None
SRR6325447 HR-TB None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR3077978 Other lineage1.1 None
ERR294248 HR-TB None
SRR6789626 Other None
ERR323036 HR-TB None
ERR294266 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR5311081 HR-TB None
ERR5311099 HR-TB None
ERR502524 HR-TB La2 None
ERR502532 HR-TB None
SRR8217918 HR-TB None
SRR7496523 Other lineage4.7 None
SRR7496509 Other None
SRR7496517 Other None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323038 HR-TB None
ERR323045 HR-TB None
ERR323043 HR-TB None
ERR323041 HR-TB None
ERR1034652 Other None
ERR5311090 HR-TB None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1035157 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR1063862 HR-TB None
ERR1063859 HR-TB None
ERR1063839 HR-TB lineage2.2 None
ERR1063857 HR-TB None
ERR1063858 HR-TB None
ERR3283010 Other La1 None
ERR3283036 HR-TB None
ERR3283017 HR-TB None
ERR3283025 HR-TB None
ERR3283027 HR-TB None
ERR3797043 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3283058 Other lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR3283048 HR-TB lineage4.9 None
ERR3468544 HR-TB None
ERR3797016 HR-TB None
ERR3797058 Other lineage4.9 None
ERR3797036 HR-TB None
ERR3797069 Other None
ERR3797083 HR-TB None
ERR3797082 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4188350 HR-TB None
ERR4407463 HR-TB None
ERR4769521 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR6358837 HR-TB None
ERR6359045 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4800341 Other lineage3 None
ERR4811142 MDR-TB None
ERR5336148 Other None
ERR6358991 HR-TB None
ERR736875 HR-TB lineage4 None
ERR702404 HR-TB None
ERR702406 HR-TB None
ERR736817 HR-TB lineage4.3.4 None
ERR736839 Other None
ERR736867 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR736874 HR-TB None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR7821163 Other lineage2.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR8976043 HR-TB None
ERR9117709 HR-TB None