lineage | Count |
---|---|
97 | |
lineage2.2 | 3 |
lineage4.6.2.2 | 2 |
lineage2.2.2 | 1 |
lineage4.9 | 13 |
lineage4 | 3 |
lineage4.5 | 1 |
lineage4.1 | 1 |
lineage4.2;La1.7 | 1 |
lineage4.3 | 1 |
lineage4.1.1 | 1 |
La1.8.1 | 1 |
lineage1.1 | 1 |
lineage4.1.2.1 | 2 |
lineage3.1 | 1 |
La1 | 1 |
lineage3.1.2 | 1 |
spoligotype | Count |
---|---|
None | 131 |
ID | Drug resistance | Lineage | Country iso2 | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6358991 | HR-TB | None | ERR8976043 | HR-TB | None | ERR736835 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786843 | Other | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR1167384 | Other | lineage4 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR26159048 | HR-TB | lineage4.9 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | ERR1035239 | HR-TB | None | SRR6325445 | HR-TB | None | ERR181744 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | SRR3675311 | Other | None | SRR3675555 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675510 | Other | None | SRR3675558 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4816466 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR2693230 | Other | None | SRR5341418 | Other | None | SRR5341333 | HR-TB | None | SRR5341330 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341456 | Other | None | ERR2693231 | Other | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | ERR278594 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2693257 | Other | None | SRR6325442 | HR-TB | None | SRR6046152 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045053 | Other | None | SRR6045399 | Other | None | SRR6046299 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046397 | Other | None | SRR6325444 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR3077978 | Other | lineage1.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR7496509 | Other | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | SRR8217918 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323041 | HR-TB | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR067681 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1034652 | Other | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283017 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR3283036 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797014 | Other | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797061 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR387051 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR5336148 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811105 | HR-TB | None |
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