lineage | Count |
---|---|
M.canetti;lineage4.9 | 2 |
lineage4.9 | 20 |
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
M.canetti;lineage4.2 | 1 |
lineage2.2 | 3 |
lineage4.9;lineage6.1.3 | 1 |
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
M.canetti;lineage4.2;lineage4.9 | 1 |
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
lineage4.9;lineage6.3 | 1 |
La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
La3;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage2.2.1 | 2 |
La1.7;lineage4.9 | 1 |
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
lineage4 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
spoligotype | Count |
---|---|
None | 52 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None |
ERR3797046 | HR-TB | lineage4.9 | None |
ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
SRR20970016 | Other | lineage2.2 | None |
ERR3445504 | Other | lineage4.9;lineage6.1.3 | None |
ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
SRR3675270 | Other | lineage4.9 | None |
SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
SRR6046046 | Other | lineage4.9 | None |
SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
ERR3283030 | HR-TB | lineage4.9 | None |
SRR6045347 | Other | lineage4.9 | None |
SRR6046593 | Other | lineage4.9 | None |
ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
ERR4769450 | Other | lineage4.9 | None |
SRR6044876 | Sensitive | lineage4.9 | None |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
SRR8217918 | HR-TB | lineage4.9 | None |
ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
SRR3675449 | Other | M.canetti;lineage4.9 | None |
SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
SRR28119827 | Other | La3;lineage4.9 | None |
ERR4769452 | Other | lineage4.9 | None |
ERR5311094 | HR-TB | lineage4.9 | None |
SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
SRR5341456 | Other | lineage4.9 | None |
ERR4811493 | HR-TB | lineage4.9 | None |
ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
ERR3283040 | HR-TB | lineage4.9 | None |
ERR11252736 | Other | lineage4.9 | None |
SRR12142339 | HR-TB | lineage2.2.1 | None |
SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
ERR323108 | HR-TB | La1.7;lineage4.9 | None |
SRR20969731 | Other | lineage2.2.1 | None |
ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
ERR3797015 | HR-TB | lineage4.9 | None |
SRR26399490 | Sensitive | lineage4.9 | None |
SRR3675461 | RR-TB | lineage4.9 | None |
SRR6044835 | Other | lineage4.9 | None |
ERR4799513 | HR-TB | lineage2.2 | None |
ERR3283055 | HR-TB | lineage4.9 | None |
ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
SRR6045053 | Other | lineage4 | None |
SRR20969708 | HR-TB | lineage2.2 | None |
SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |