lineage | Count |
---|---|
lineage4.9 | 15 |
lineage4.3.4.2.1 | 1 |
lineage2.2.1 | 2 |
lineage1.2.2.2 | 1 |
lineage4.3.2.1 | 1 |
La1.7;lineage4.9 | 3 |
lineage1;lineage4.9 | 1 |
La1.2;La1.8.1 | 1 |
lineage4.9;lineage9 | 1 |
La1.7.1;lineage4.9 | 1 |
M.canetti;lineage4.9 | 2 |
1 | |
lineage4.9;lineage6.1.3 | 1 |
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
La1.7 | 1 |
La1.7;M.canetti;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 34 |
ID | Drug resistance | Lineage | Country iso2 | ERR1063858 | HR-TB | lineage4.9 | None | ERR13249719 | Sensitive | lineage4.9 | None | SRR3086368 | MDR-TB | lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR11044854 | Sensitive | lineage2.2.1 | None | ERR11044815 | Sensitive | lineage1.2.2.2 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR8773634 | Sensitive | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR212001 | HR-TB | None | ERR181824 | HR-TB | lineage4.9 | None | ERR2510863 | MDR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR8773636 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR11044855 | Sensitive | lineage2.2.1 | None | ERR4830353 | Other | La1.7 | None | ERR841416 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR2510670 | MDR-TB | lineage4.9 | it | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None |
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