Rv0006 - c.1098T>G
Drug resistance types
3 Sensitive
1 RR-TB
17 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.9 | 21 |
| lineage4.6.3;lineage4.9 | 1 |
| 5 | |
| lineage2.2.2;lineage4 | 1 |
| lineage4.3.4.2.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.1;lineage4.9 | 4 |
| lineage2.2.1 | 3 |
| lineage6.1.3 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4 | 2 |
| La3;lineage4.9 | 2 |
| lineage2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| La1;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| lineage4.9;lineage6.3 | 5 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;lineage1.1.2 | 1 |
| La1.8.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| lineage4.8 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| M.canetti;lineage1 | 1 |
| La3 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 75 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4407452 | Other | lineage3 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR1196566 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR2446566 | Other | lineage4.9 | None | SRR6789626 | Other | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR1165699 | Other | lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1196583 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | Other | lineage4.9 | None | SRR28119805 | Other | lineage4.9 | None | ERR4817060 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR4407463 | HR-TB | None | SRR1172951 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4817735 | Other | lineage4.8 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR1196546 | Other | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | SRR28119777 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR1172817 | Other | La3 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR3797046 | HR-TB | lineage4.9 | None |
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