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SRA data
Rv0001
- c.801G>C
Drug resistance types
0 Sensitive
0 RR-TB
5 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
7
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
2
lineage2.2
2
La1.7;M.canetti;lineage4.9
2
M.canetti;lineage4.9
1
lineage3
1
lineage2.2.1
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
16
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11252736
Other
lineage4.9
None
ERR3283018
HR-TB
lineage4.9
None
ERR473332
Other
lineage4.9
None
ERR9119669
HR-TB
lineage4.9
None
SRR11662690
HR-TB
lineage4.9
None
SRR20969708
HR-TB
lineage2.2
None
SRR20969731
Other
lineage2.2.1
None
SRR20970016
Other
lineage2.2
None
SRR28044873
Pre-XDR-TB
lineage3
None
SRR5535933
Other
lineage4.9
None
Showing 1 to 10 of 16 entries
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