Rv0407 - c.414A>G
Drug resistance types
38 Sensitive
0 RR-TB
122 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 1 |
| La1 | 2 |
| lineage3.1.2 | 1 |
| 146 | |
| lineage4.1.2.1 | 8 |
| lineage2.2 | 4 |
| lineage4.3.3 | 3 |
| lineage4 | 15 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8;lineage4.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.9 | 16 |
| lineage2.2.1.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1 | 5 |
| La1.8.1 | 2 |
| lineage4.2;La1.7 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage3 | 3 |
| lineage3.1 | 2 |
| lineage1.1 | 1 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 230 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798406 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR7451301 | Sensitive | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR7451300 | Sensitive | None | ERR751326 | Sensitive | lineage4 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8976043 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119669 | HR-TB | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9125480 | Sensitive | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR987722 | HR-TB | None | ERR9786843 | Other | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1172310 | HR-TB | None | SRR1169306 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1640750 | HR-TB | None | SRR1174897 | HR-TB | None | SRR13423544 | Other | lineage4.5 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR14782405 | HR-TB | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR16058668 | Sensitive | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR24061599 | Sensitive | None | SRR22179528 | Sensitive | None | SRR24061598 | Sensitive | None | SRR20970016 | Other | lineage2.2 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR24061600 | Sensitive | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR1035239 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675502 | Other | None | SRR6325445 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR158583 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4815361 | Sensitive | None | ERR181744 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675234 | Other | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675383 | HR-TB | None | SRR3675222 | Other | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4816019 | Sensitive | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | SRR3675558 | HR-TB | None | ERR1035162 | Other | None | ERR4816466 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817181 | Sensitive | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | SRR5818661 | Sensitive | dj | ERR3275196 | Other | lineage2.2.1 | nl | ERR2229143 | Other | lineage4.1.1 | None | ERR234659 | HR-TB | None | SRR5818653 | Sensitive | dj | SRR5818668 | Sensitive | dj | SRR5818567 | Sensitive | dj | SRR5818614 | Sensitive | dj | ERR2509673 | Other | lineage2.2.1 | None | ERR3275220 | Other | lineage3 | nl | SRR5818676 | Sensitive | dj | SRR5818652 | Sensitive | dj | SRR5341418 | Other | None | SRR5341456 | Other | None | SRR5341470 | HR-TB | None | ERR1035138 | MDR-TB | None | SRR5341330 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693231 | Other | None | ERR4819927 | Sensitive | None | ERR4821053 | Other | lineage3 | None | ERR4821046 | Sensitive | None | ERR2693239 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR5535933 | HR-TB | None | ERR2693230 | Other | None | ERR278594 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | ERR2446144 | Other | lineage3 | nl | SRR6046133 | HR-TB | None | SRR5818605 | Sensitive | None | ERR2693232 | Other | lineage4.9 | None | SRR5818685 | Sensitive | None | SRR6044838 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046046 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6325442 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR4831117 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | ERR294248 | HR-TB | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR502889 | Other | None | ERR502524 | HR-TB | La2 | None | ERR5311099 | HR-TB | None | ERR323039 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323063 | HR-TB | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR067681 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR3283017 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283058 | Other | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3597003 | Sensitive | None | ERR3283055 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797017 | Other | None | ERR3597005 | Sensitive | None | ERR3597001 | Sensitive | None | ERR3797024 | Other | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3797014 | Other | None | ERR3597002 | Sensitive | None | ERR3597007 | Sensitive | None | ERR3797016 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797061 | Other | None | ERR473332 | Other | lineage4 | None | ERR3797082 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4188350 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4769450 | HR-TB | None |
|---|
