Rv0486 - c.573C>T
Drug resistance types
39 Sensitive
7 RR-TB
21 HR-TB
23 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 34 |
| lineage4.3.2.1 | 1 |
| lineage3 | 6 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9 | 21 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2 | 3 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.1 | 4 |
| lineage4 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.3.3 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| M.canetti;lineage4.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.1.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.1.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 107 |
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6797507 | Sensitive | lineage1.1.3.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2179840 | Sensitive | lineage3 | cn | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR27450589 | Sensitive | lineage1.1.3.1 | None | SRR6650353 | Sensitive | lineage1.1.3.1 | None | SRR2100479 | Sensitive | lineage1.1.3.1 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR2513796 | Sensitive | lineage1.1.3.1 | gb | SRR6824413 | Sensitive | lineage3 | cn | ERR11252736 | Other | lineage4.9 | None | ERR4819502 | Sensitive | lineage1.1.3.1 | gb | ERR137286 | Other | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR9119133 | Sensitive | lineage1.1.3.1 | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR6650265 | Sensitive | lineage1.1.3.1 | None | SRR26056409 | Sensitive | lineage1.1.3.1 | None | ERR9119669 | MDR-TB | lineage4.9 | None | SRR6824451 | MDR-TB | lineage2.2.1 | cn | SRR5341384 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR22249696 | Sensitive | lineage1.1.3.1 | None | SRR26112581 | Sensitive | lineage1.1.3.1 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR5341453 | Other | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR2101104 | Sensitive | lineage1.1.3.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR330666 | Sensitive | lineage1.1.3.1 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR7131070 | Sensitive | lineage4.3.3 | None | ERR4820090 | Sensitive | lineage1.1.3.1 | gb | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR4829421 | Sensitive | lineage1.1.3.1 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR2100691 | Sensitive | lineage1.1.3.1 | None | SRR6650164 | Other | lineage1.1.3.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR2100982 | Sensitive | lineage1.1.3.1 | None | SRR18213666 | Sensitive | lineage1.1.3.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6650345 | Sensitive | lineage1.1.3.1 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR158600 | Sensitive | lineage1.1.3.1 | None | ERR294179 | Sensitive | lineage1.1.3.1 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4812018 | Sensitive | lineage4.3.3 | pe | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR6797410 | Sensitive | lineage1.1.3.1 | None | ERR4796254 | Other | lineage4.9 | None | ERR2179683 | Sensitive | lineage3 | cn | SRR6797817 | HR-TB | lineage1.1.3.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR230066 | Sensitive | lineage1.1.3.1 | None | SRR18213663 | Sensitive | lineage1.1.3.1 | None | ERR4818189 | Sensitive | lineage1.1.3.1 | gb | ERR5908195 | Sensitive | lineage1.1.3.1 | None | ERR2179844 | Sensitive | lineage3 | cn | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR1723539 | MDR-TB | lineage2.2.1 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR20970016 | Other | lineage2.2 | None | SRR1723417 | Sensitive | lineage3 | cn | SRR26399395 | Sensitive | lineage2.2.1.1 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | SRR29126734 | Sensitive | lineage1.1.3.1 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR228115 | Sensitive | lineage1.1.3.1 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR294200 | Sensitive | lineage1.1.3.1 | None | SRR2101002 | Sensitive | lineage1.1.3.1 | None | ERR2513339 | Sensitive | lineage1.1.3.1 | gb |
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