Rv0486 - c.573C>T
Drug resistance types
48 Sensitive
5 RR-TB
16 HR-TB
14 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 34 |
| lineage4.3.3 | 2 |
| lineage4.9 | 24 |
| M.canetti;lineage4.2 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage3 | 6 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage2.2.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| lineage4.1.2 | 1 |
| lineage2.2 | 3 |
| lineage2.2.1 | 4 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La2;lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.3.2.1 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 110 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4818189 | Sensitive | lineage1.1.3.1 | gb |
| SRR7131070 | Sensitive | lineage4.3.3 | None |
| ERR5908195 | Sensitive | lineage1.1.3.1 | None |
| ERR4819864 | RR-TB | lineage1.1.3.1 | None |
| ERR323085 | Sensitive | lineage4.9 | None |
| ERR736834 | Sensitive | lineage4.9 | None |
| SRR6650265 | Sensitive | lineage1.1.3.1 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| SRR5341299 | HR-TB | lineage4.9 | None |
| ERR4024991 | Other | lineage4.8;lineage4.9 | None |
| ERR2513796 | Sensitive | lineage1.1.3.1 | gb |
| SRR28044873 | Pre-XDR-TB | lineage3 | None |
| SRR2100479 | Sensitive | lineage1.1.3.1 | None |
| SRR2100691 | Sensitive | lineage1.1.3.1 | None |
| SRR2100982 | Sensitive | lineage1.1.3.1 | None |
| SRR2101002 | Sensitive | lineage1.1.3.1 | None |
| SRR2101104 | Sensitive | lineage1.1.3.1 | None |
| ERR4796254 | Sensitive | lineage4.9 | None |
| ERR323062 | Sensitive | lineage4.9 | None |
| ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
| ERR4820090 | Sensitive | lineage1.1.3.1 | gb |
| ERR137286 | Other | lineage4.9 | None |
| ERR736872 | HR-TB | lineage4.9 | None |
| SRR1175127 | Other | lineage2.2.1.2 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR158600 | Sensitive | lineage1.1.3.1 | None |
| ERR2513339 | Sensitive | lineage1.1.3.1 | gb |
| ERR228115 | Sensitive | lineage1.1.3.1 | None |
| SRR9970980 | HR-TB | lineage4.1.2 | None |
| SRR20969708 | HR-TB | lineage2.2 | None |
| SRR6824413 | Sensitive | lineage3 | cn |
| ERR294200 | Sensitive | lineage1.1.3.1 | None |
| SRR6797410 | Sensitive | lineage1.1.3.1 | None |
| SRR20969731 | Other | lineage2.2.1 | None |
| SRR6650164 | Other | lineage1.1.3.1 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| SRR29126734 | Sensitive | lineage1.1.3.1 | None |
| SRR14801759 | HR-TB | La1.7;lineage4.9 | None |
| ERR1063857 | MDR-TB | La2;lineage4.9 | None |
| SRR5341384 | HR-TB | lineage4.9 | None |
| SRR26112581 | Sensitive | lineage1.1.3.1 | None |
| ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR5341453 | Other | lineage4.9 | None |
| SRR6797817 | HR-TB | lineage1.1.3.1 | None |
| SRR12416842 | HR-TB | lineage4.9 | None |
| ERR6866639 | Other | lineage4.9 | None |
| ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR3675441 | Other | lineage4.9 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR18213663 | Sensitive | lineage1.1.3.1 | None |
| ERR330666 | Sensitive | lineage1.1.3.1 | None |
| SRR27450589 | Sensitive | lineage1.1.3.1 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| SRR6797507 | Sensitive | lineage1.1.3.1 | None |
| SRR20970016 | Other | lineage2.2 | None |
| ERR4829421 | Sensitive | lineage1.1.3.1 | None |
| SRR26399395 | Sensitive | lineage2.2.1.1 | None |
| SRR28351339 | MDR-TB | lineage4 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| SRR18213666 | Sensitive | lineage1.1.3.1 | None |
| SRR22249696 | Sensitive | lineage1.1.3.1 | None |
| ERR2179840 | Sensitive | lineage3 | cn |
| ERR6866022 | Other | lineage4.8;lineage4.9 | None |
| SRR1723539 | MDR-TB | lineage2.2.1 | None |
| ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| ERR181744 | HR-TB | La3;lineage4.9 | None |
| ERR11252736 | Other | lineage4.9 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR4810624 | MDR-TB | lineage2.2 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| ERR1063839 | MDR-TB | La2;lineage2.2 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| SRR6650353 | Sensitive | lineage1.1.3.1 | None |
| SRR6824451 | MDR-TB | lineage2.2.1 | cn |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| ERR9119669 | HR-TB | lineage4.9 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| ERR9119133 | Sensitive | lineage1.1.3.1 | None |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| ERR2179844 | Sensitive | lineage3 | cn |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR26056409 | Sensitive | lineage1.1.3.1 | None |
| ERR4798099 | Other | lineage4.9 | None |
| ERR4769521 | RR-TB | lineage4.9 | None |
| SRR3675235 | Sensitive | lineage4.9 | None |
| ERR212123 | Other | lineage4.9 | None |
| ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR4769450 | Other | lineage4.9 | None |
| ERR124636 | Sensitive | lineage4.9 | None |
| ERR161037 | Other | lineage4.9 | None |
| SRR15014655 | Other | M.canetti;lineage1 | None |
| SRR9970981 | RR-TB | lineage4.3.2.1 | None |
| SRR6650345 | Sensitive | lineage1.1.3.1 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| SRR1723417 | Sensitive | lineage3 | cn |
| ERR3273109 | HR-TB | lineage4 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| ERR294179 | Sensitive | lineage1.1.3.1 | None |
| ERR4812018 | Sensitive | lineage4.3.3 | pe |
| ERR2179683 | Sensitive | lineage3 | cn |
| ERR212138 | HR-TB | lineage4.9 | None |
| ERR4819502 | Sensitive | lineage1.1.3.1 | gb |
| ERR1035122 | Sensitive | lineage4.9 | None |
| SRR8217918 | HR-TB | lineage4.9 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| ERR230066 | Sensitive | lineage1.1.3.1 | None |
| SRR3675449 | Other | M.canetti;lineage4.9 | None |
| SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
