Rv3793 - c.1275G>C
Drug resistance types
2 Sensitive
1 RR-TB
71 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3;lineage2.1 | 1 |
| lineage4.1 | 1 |
| 48 | |
| lineage4 | 6 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage2.2.1 | 5 |
| lineage3 | 1 |
| lineage4.1.2.1 | 8 |
| lineage1.1 | 1 |
| lineage4.3.3 | 2 |
| La2 | 1 |
| lineage4.9 | 8 |
| lineage3.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4818929 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6045952 | HR-TB | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341470 | HR-TB | None | SRR6046514 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325442 | HR-TB | None | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323036 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | ERR502524 | HR-TB | La2 | None | ERR294248 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323038 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311090 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR3283017 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR473332 | Other | lineage4 | None | ERR4188350 | HR-TB | None | ERR3797083 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4769474 | HR-TB | lineage4 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR736865 | HR-TB | None | ERR6358837 | HR-TB | None | ERR8976043 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR987722 | HR-TB | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1174897 | HR-TB | None | SRR1172310 | HR-TB | None | SRR1173106 | MDR-TB | lineage4.3.3 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR13861566 | Other | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861241 | HR-TB | lineage4.9 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR13861666 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None |
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