Rv2754c - c.570G>C


Drug resistance types
13 Sensitive 14 RR-TB 79 HR-TB 39 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 31 Other
lineage Counts
lineage Count
lineage4.9 53
La1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 12
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage3 1
lineage4 3
La1.7;M.canetti;lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9 22
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 1
lineage2.2 1
lineage2.1;lineage4.9 5
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage2.1;lineage4 1
2
lineage4.2;lineage4.6.3;lineage4.9.1 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.2 1
lineage3 1
lineage4.1.2.1 2
lineage2.2.1 4
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.3.2.1 1
La1.7;lineage4.9 3
lineage4.3.4.2.1 2
lineage4.5 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage1.1 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
La3;M.canetti;lineage4.9 2
La2;lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage1.1.2 1
La2;lineage4.9 1
lineage4.1.1.3 1
lineage1.1.2;lineage4 1
La1;lineage2;lineage4.9 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage6.3 1
lineage6.1.3 1
M.canetti;lineage4.9 2
La1.7.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.8.1 2
M.canetti;lineage2.2 1
lineage4.1.2.1.1 1
spoligotype Counts
spoligotype Count
None 178
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341453 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR5341469 HR-TB lineage4.9 None
SRR13861400 Other lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR1063896 Sensitive None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR502511 Sensitive lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4821053 RR-TB lineage3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4798099 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4816478 HR-TB lineage4 None
SRR13423544 Other lineage4.5 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR12416842 HR-TB lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR13861305 Other lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162864 Other lineage4.1.2.1 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR4819241 Other lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1158918 Sensitive lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR137286 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR3797083 RR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR5341310 Other lineage1.1.2 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR751326 Other lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR473332 Other lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR4818929 HR-TB lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341300 HR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR13861381 HR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1791696 Other La1.8.1 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None